RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	TRIM38	O00635	465 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	FBP2	O00757	339 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	IPO13	O94829	963 aa	Known RBP	13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	RTN3	O95197	1032 aa	Predicted RBP	13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	CCR1	P32246	355 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	BRCC3	P46736	316 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	LEPR	P48357	1165 aa	Known RBP	13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	KPNA2	P52292	529 aa	Known RBP	13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	WNT3A	P56704	352 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	PSME3	P61289	254 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	SP3	Q02447	781 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	LSAMP	Q13449	338 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	LRP8	Q14114	963 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	SLC14A2	Q15849	920 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	AP1AR	Q63HQ0	302 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	HASPIN	Q8TF76	798 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	PPP1R2P1	Q96PQ5	205 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	SMOC2	Q9H3U7	446 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507		Q9H521	79 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	NOL6	Q9H6R4	1146 aa	Known RBP	13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	CYP4F12	Q9HCS2	524 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	ATP13A1	Q9HD20	1204 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	ABCC13	Q9NSE7	274 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	OSER1	Q9NX31	292 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	MPP6	Q9NZW5	540 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	SARDH	Q9UL12	918 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507		E7ENX8	843 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	MYBPC1	Q00872	1141 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	CREB5	Q02930	508 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	SEPT6	Q14141	434 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	PPP1R3A	Q16821	1122 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	FAM83E	Q2M2I3	478 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	IL23R	Q5VWK5	629 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	CYHR1	Q6ZMK1	362 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	SCD5	Q86SK9	330 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	C14orf80	Q86SX3	495 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	SERINC5	Q86VE9	423 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	PCDH20	Q8N6Y1	951 aa	Known RBP	13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	RTL3	Q8N8U3	475 aa	Known RBP	13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	TRIM62	Q9BVG3	475 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	MRPL1	Q9BYD6	325 aa	Known RBP	13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	CACNA2D2	Q9NY47	1150 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	FIS1	Q9Y3D6	152 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	TNFRSF10B	O14763	440 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	B3GAT3	O94766	335 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	ZNF26	P17031	533 aa	Predicted RBP	13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	HDC	P19113	662 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	SLC12A2	P55011	1212 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	TRIM25	Q14258	630 aa	Known RBP	13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	IHH	Q14623	411 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	FAM219B	Q5XKK7	198 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	TIGD7	Q6NT04	549 aa	Predicted RBP	13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	ISLR2	Q6UXK2	745 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	CUZD1	Q86UP6	607 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	SPATA24	Q86W54	205 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	AHI1	Q8N157	1196 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	METTL25	Q8N6Q8	603 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	OR13J1	Q8NGT2	312 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	ANKRD49	Q8WVL7	239 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	UNC93B1	Q9H1C4	597 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	TRPC7	Q9HCX4	862 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	NDUFA13	Q9P0J0	144 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	SUCO	Q9UBS9	1254 aa	Known RBP	13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	IPO11	Q9UI26	975 aa	Known RBP	13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	LZTS1	Q9Y250	596 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	TRPV2	Q9Y5S1	764 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507	HS3ST4	Q9Y661	456 aa		13.24	□□□□□ -0.29
SCAPER-215	ENST00000565507		E9PAM4	449 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	TRIM24	O15164	1050 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	WISP3	O95389	354 aa	Predicted RBP	13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	C8B	P07358	591 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	LTA4H	P09960	611 aa	Known RBP	13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	RPL5	P46777	297 aa	Known RBP	13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	SLC5A3	P53794	718 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	INHBC	P55103	352 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	GALNT1	Q10472	559 aa	Predicted RBP	13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	PSMD5	Q16401	504 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	PCSK7	Q16549	785 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	C6orf52	Q5T4I8	152 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	AGAP9	Q5VTM2	703 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	PAOX	Q6QHF9	649 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	MRPL10	Q7Z7H8	261 aa	Known RBP	13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	RNF135	Q8IUD6	432 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	ATP6V1E2	Q96A05	226 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	CCDC126	Q96EE4	140 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	FAR2	Q96K12	515 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	CNBD2	Q96M20	576 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	SLC2A11	Q9BYW1	496 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	PCDHAC1	Q9H158	963 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	SLC25A51	Q9H1U9	297 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	ZNF696	Q9H7X3	374 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	TBC1D13	Q9NVG8	400 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	ADA2	Q9NZK5	511 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	NUDT5	Q9UKK9	219 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	CNOT11	Q9UKZ1	510 aa	Known RBP	13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	PADI3	Q9ULW8	664 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	HEATR9	A2RTY3	570 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507		M0QZQ0	153 aa		13.23	□□□□□ -0.29
SCAPER-215	ENST00000565507	UBFD1	O14562	309 aa	Known RBP	13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms