RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 PAPOLAP51003 745 aaKnown RBP8.65□□□□□ -1.02
CAPN3-213ENST00000565173 BLKP51451 505 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 NDST2P52849 883 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 UCNP55089 124 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 TMPRSS3P57727 454 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 ELP6Q0PNE2 266 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 MAMLD1Q13495 774 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 ARHGAP40Q5TG30 622 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 BROXQ5VW32 411 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 ENPP7Q6UWV6 458 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 CYP4V2Q6ZWL3 525 aaPredicted RBP8.65□□□□□ -1.02
CAPN3-213ENST00000565173 DNAAF5Q86Y56 855 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 HID1Q8IV36 788 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 ARHGAP12Q8IWW6 846 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 FSTL5Q8N475 847 aaPredicted RBP8.65□□□□□ -1.02
CAPN3-213ENST00000565173 TSEN2Q8NCE0 465 aaKnown RBP8.65□□□□□ -1.02
CAPN3-213ENST00000565173 WDR48Q8TAF3 677 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 KCNE4Q8WWG9 221 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 GLMNQ92990 594 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 NAT6Q93015 286 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 CELF6Q96J87 481 aaKnown RBP8.65□□□□□ -1.02
CAPN3-213ENST00000565173 ZNF641Q96N77 438 aaPredicted RBP8.65□□□□□ -1.02
CAPN3-213ENST00000565173 EDEM3Q9BZQ6 932 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 SEPT11Q9NVA2 429 aaKnown RBP8.65□□□□□ -1.02
CAPN3-213ENST00000565173 GPATCH2LQ9NWQ4 482 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 UBA2Q9UBT2 640 aaPredicted RBP8.65□□□□□ -1.02
CAPN3-213ENST00000565173 OR1A2Q9Y585 309 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 PIEZO2Q9H5I5 2752 aa8.65□□□□□ -1.03
CAPN3-213ENST00000565173 FLNBO75369 2602 aaKnown RBP8.65□□□□□ -1.03
CAPN3-213ENST00000565173 CFAP69A5D8W1 941 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 ANKRD62A6NC57 917 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 TMEM191CA6NGB0 347 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 K7ENP7 123 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 TRAFD1O14545 582 aaPredicted RBP8.64□□□□□ -1.03
CAPN3-213ENST00000565173 EFSO43281 561 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 ZIC2O95409 532 aaPredicted RBP8.64□□□□□ -1.03
CAPN3-213ENST00000565173 PRKCGP05129 697 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 ATP1A3P13637 1013 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 GM2AP17900 193 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 RBMS1P29558 406 aaKnown RBP8.64□□□□□ -1.03
CAPN3-213ENST00000565173 HTR7P34969 479 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 TRIM23P36406 574 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 TPI1P60174 286 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 SRP54P61011 504 aaKnown RBP8.64□□□□□ -1.03
CAPN3-213ENST00000565173 CCL7P80098 99 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 MYL5Q02045 173 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 CFHR1Q03591 330 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 VAC14Q08AM6 782 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 NSUN2Q08J23 767 aaKnown RBP eCLIP8.64□□□□□ -1.03
CAPN3-213ENST00000565173 RALGDSQ12967 914 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 MTM1Q13496 603 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 GRM3Q14832 879 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 NFATC4Q14934 902 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 ELOCQ15369 112 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 TCEA2Q15560 299 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 KIF26BQ2KJY2 2108 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 ERMARDQ5T6L9 678 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 PLEKHA7Q6IQ23 1121 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 ESRP1Q6NXG1 681 aaKnown RBP8.64□□□□□ -1.03
CAPN3-213ENST00000565173 DCUN1D2Q6PH85 259 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 INO80CQ6PI98 192 aaPredicted RBP8.64□□□□□ -1.03
CAPN3-213ENST00000565173 BRAT1Q6PJG6 821 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 OGFOD3Q6PK18 319 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 LIPIQ6XZB0 460 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 ARHGAP36Q6ZRI8 547 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 B3GNT8Q7Z7M8 397 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 CLEC14AQ86T13 490 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 SRLQ86TD4 932 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 TP53INP2Q8IXH6 220 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 SDR16C5Q8N3Y7 309 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 ARL10Q8N8L6 244 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 KYQ8NBH2 561 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 PLA2G15Q8NCC3 412 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 WDR36Q8NI36 951 aaKnown RBP8.64□□□□□ -1.03
CAPN3-213ENST00000565173 PCDH19Q8TAB3 1148 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 TTC9Q92623 222 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 ECHDC3Q96DC8 303 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 WBP1Q96G27 269 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 PCMTD1Q96MG8 357 aaPredicted RBP8.64□□□□□ -1.03
CAPN3-213ENST00000565173 TUBGCP5Q96RT8 1024 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 PEBP4Q96S96 227 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 RBM15Q96T37 977 aaKnown RBP eCLIP8.64□□□□□ -1.03
CAPN3-213ENST00000565173 NCAPGQ9BPX3 1015 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 TRIM7Q9C029 511 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 SEMA4CQ9C0C4 833 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 SIRPGQ9P1W8 387 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 GULP1Q9UBP9 304 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 ATP8A1Q9Y2Q0 1164 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 DGKBQ9Y6T7 804 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 LRP4O75096 1905 aa8.64□□□□□ -1.03
CAPN3-213ENST00000565173 CCDC187A0A096LP49 1063 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 A0A1W2PQM1 296 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 TMEM202A6NGA9 273 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 TEX33O43247 280 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 PALMO75781 387 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 RECQL5O94762 991 aaPredicted RBP8.63□□□□□ -1.03
CAPN3-213ENST00000565173 TNFSF15O95150 251 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 RASGRP1O95267 797 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 ITGA2BP08514 1039 aa8.63□□□□□ -1.03
CAPN3-213ENST00000565173 HOXC4P09017 264 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms