RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 CTBP1Q13363 440 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 TAF1AQ15573 450 aaPredicted RBP19.67■□□□□ 0.74
CLN6-205ENST00000564846 GKAP1Q5VSY0 366 aaPredicted RBP19.67■□□□□ 0.74
CLN6-205ENST00000564846 KYAT3Q6YP21 454 aaKnown RBP19.67■□□□□ 0.74
CLN6-205ENST00000564846 TMEM184AQ6ZMB5 413 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 GALNT7Q86SF2 657 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 DENND6AQ8IWF6 608 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 NPAS3Q8IXF0 933 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 HDAC10Q969S8 669 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 TM6SF2Q9BZW4 377 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 SNX15Q9NRS6 342 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 SLC25A13Q9UJS0 675 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 FBXO5Q9UKT4 447 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 ARL5AQ9Y689 179 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 ATG2AQ2TAZ0 1938 aa19.66■□□□□ 0.74
CLN6-205ENST00000564846 PRKCGP05129 697 aa19.66■□□□□ 0.74
CLN6-205ENST00000564846 PIRTP0C851 137 aa19.66■□□□□ 0.74
CLN6-205ENST00000564846 GABRB3P28472 473 aa19.66■□□□□ 0.74
CLN6-205ENST00000564846 INSCQ1MX18 579 aa19.66■□□□□ 0.74
CLN6-205ENST00000564846 RARS2Q5T160 578 aaKnown RBP19.66■□□□□ 0.74
CLN6-205ENST00000564846 ASTLQ6HA08 431 aaPredicted RBP19.66■□□□□ 0.74
CLN6-205ENST00000564846 GPR149Q86SP6 731 aa19.66■□□□□ 0.74
CLN6-205ENST00000564846 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.66■□□□□ 0.74
CLN6-205ENST00000564846 LRRC8CQ8TDW0 803 aa19.66■□□□□ 0.74
CLN6-205ENST00000564846 PDCD6IPQ8WUM4 868 aaKnown RBP19.66■□□□□ 0.74
CLN6-205ENST00000564846 OSCP1Q8WVF1 389 aa19.66■□□□□ 0.74
CLN6-205ENST00000564846 CEP44Q9C0F1 390 aa19.66■□□□□ 0.74
CLN6-205ENST00000564846 C12orf65Q9H3J6 166 aaKnown RBP19.66■□□□□ 0.74
CLN6-205ENST00000564846 IGFLR1Q9H665 355 aa19.66■□□□□ 0.74
CLN6-205ENST00000564846 DUS2Q9NX74 493 aaKnown RBP19.66■□□□□ 0.74
CLN6-205ENST00000564846 HACD3Q9P035 362 aa19.66■□□□□ 0.74
CLN6-205ENST00000564846 KCTD3Q9Y597 815 aa19.66■□□□□ 0.74
CLN6-205ENST00000564846 SPO11Q9Y5K1 396 aa19.66■□□□□ 0.74
CLN6-205ENST00000564846 C2orf81A6NN90 581 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 SOCS5O75159 536 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 RPP40O75818 363 aaKnown RBP19.65■□□□□ 0.74
CLN6-205ENST00000564846 SRCP12931 536 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 GRIA4P48058 902 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 CD151P48509 253 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 ARSDP51689 593 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 MPP1Q00013 466 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 ILF2Q12905 390 aaKnown RBP19.65■□□□□ 0.74
CLN6-205ENST00000564846 QPCTQ16769 361 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 ARMC12Q5T9G4 340 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 GLT6D1Q7Z4J2 308 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 OR2AP1Q8NGE2 309 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 OR6P1Q8NGX9 317 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 FGF13Q92913 245 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 SMARCD2Q92925 531 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 LRRC3BQ96PB8 259 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 GDE1Q9NZC3 331 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 ZNF821O75541 412 aaPredicted RBP19.65■□□□□ 0.74
CLN6-205ENST00000564846 PGLSO95336 258 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 PSMA3P25788 255 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 CTSOP43234 321 aaPredicted RBP19.65■□□□□ 0.74
CLN6-205ENST00000564846 SERPINB4P48594 390 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 RPL26P61254 145 aaKnown RBP19.65■□□□□ 0.74
CLN6-205ENST00000564846 SNRPD1P62314 119 aaKnown RBP19.65■□□□□ 0.74
CLN6-205ENST00000564846 BCL2L1Q07817 233 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 GRM3Q14832 879 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 DHCR24Q15392 516 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 FAM78AQ5JUQ0 283 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 KIAA0907Q7Z7F0 614 aaPredicted RBP19.65■□□□□ 0.74
CLN6-205ENST00000564846 AHI1Q8N157 1196 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 DNAJC1Q96KC8 554 aaKnown RBP19.65■□□□□ 0.74
CLN6-205ENST00000564846 RPL10LQ96L21 214 aaKnown RBP19.65■□□□□ 0.74
CLN6-205ENST00000564846 TBATAQ96M53 351 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 ASB16Q96NS5 453 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 NLE1Q9NVX2 485 aaPredicted RBP19.65■□□□□ 0.74
CLN6-205ENST00000564846 EVLQ9UI08 416 aaPredicted RBP19.65■□□□□ 0.74
CLN6-205ENST00000564846 RPL26L1Q9UNX3 145 aaKnown RBP19.65■□□□□ 0.74
CLN6-205ENST00000564846 PCDHB9Q9Y5E1 797 aa19.65■□□□□ 0.74
CLN6-205ENST00000564846 NUP210Q8TEM1 1887 aaPredicted RBP19.64■□□□□ 0.73
CLN6-205ENST00000564846 RFXAPO00287 272 aa19.64■□□□□ 0.73
CLN6-205ENST00000564846 GSTA1P08263 222 aa19.64■□□□□ 0.73
CLN6-205ENST00000564846 F7P08709 466 aaPredicted RBP19.64■□□□□ 0.73
CLN6-205ENST00000564846 VIPR2P41587 438 aa19.64■□□□□ 0.73
CLN6-205ENST00000564846 ABCG1P45844 678 aa19.64■□□□□ 0.73
CLN6-205ENST00000564846 LEPRP48357 1165 aaKnown RBP19.64■□□□□ 0.73
CLN6-205ENST00000564846 ZNF140P52738 457 aaPredicted RBP19.64■□□□□ 0.73
CLN6-205ENST00000564846 EPHB1P54762 984 aa19.64■□□□□ 0.73
CLN6-205ENST00000564846 ECT2LQ008S8 904 aa19.64■□□□□ 0.73
CLN6-205ENST00000564846 DGKKQ5KSL6 1271 aa19.64■□□□□ 0.73
CLN6-205ENST00000564846 PTAR1Q7Z6K3 402 aaPredicted RBP19.64■□□□□ 0.73
CLN6-205ENST00000564846 PIGWQ7Z7B1 504 aa19.64■□□□□ 0.73
CLN6-205ENST00000564846 CMC1Q7Z7K0 106 aa19.64■□□□□ 0.73
CLN6-205ENST00000564846 CILP2Q8IUL8 1156 aa19.64■□□□□ 0.73
CLN6-205ENST00000564846 BPIFB1Q8TDL5 484 aa19.64■□□□□ 0.73
CLN6-205ENST00000564846 ZNF75CPQ92670 426 aaPredicted RBP19.64■□□□□ 0.73
CLN6-205ENST00000564846 TIFAQ96CG3 184 aa19.64■□□□□ 0.73
CLN6-205ENST00000564846 MYO19Q96H55 970 aa19.64■□□□□ 0.73
CLN6-205ENST00000564846 NSUN3Q9H649 340 aaKnown RBP19.64■□□□□ 0.73
CLN6-205ENST00000564846 ATP13A3Q9H7F0 1226 aa19.64■□□□□ 0.73
CLN6-205ENST00000564846 FGFR1OP2Q9NVK5 253 aa19.64■□□□□ 0.73
CLN6-205ENST00000564846 OBP2AQ9NY56 170 aa19.64■□□□□ 0.73
CLN6-205ENST00000564846 SLC39A10Q9ULF5 831 aa19.64■□□□□ 0.73
CLN6-205ENST00000564846 A0A096LPK6 155 aa19.63■□□□□ 0.73
CLN6-205ENST00000564846 EBAG9O00559 213 aa19.63■□□□□ 0.73
CLN6-205ENST00000564846 HTRA2O43464 458 aaPredicted RBP19.63■□□□□ 0.73
CLN6-205ENST00000564846 GLP2RO95838 553 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms