RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 PRRT3Q5FWE3 981 aa18.66■□□□□ 0.58
CLN6-204ENST00000564752 PPP6R3Q5H9R7 873 aaPredicted RBP18.66■□□□□ 0.58
CLN6-204ENST00000564752 MACC1Q6ZN28 852 aa18.66■□□□□ 0.58
CLN6-204ENST00000564752 RFX8Q6ZV50 586 aa18.66■□□□□ 0.58
CLN6-204ENST00000564752 EFL1Q7Z2Z2 1120 aaKnown RBP18.66■□□□□ 0.58
CLN6-204ENST00000564752 PSTKQ8IV42 348 aaKnown RBP18.66■□□□□ 0.58
CLN6-204ENST00000564752 SPACA3Q8IXA5 215 aa18.66■□□□□ 0.58
CLN6-204ENST00000564752 PHACTR4Q8IZ21 702 aa18.66■□□□□ 0.58
CLN6-204ENST00000564752 TPCN2Q8NHX9 752 aa18.66■□□□□ 0.58
CLN6-204ENST00000564752 HIC2Q96JB3 615 aa18.66■□□□□ 0.58
CLN6-204ENST00000564752 FCRL3Q96P31 734 aaPredicted RBP18.66■□□□□ 0.58
CLN6-204ENST00000564752 KCTD15Q96SI1 283 aaPredicted RBP18.66■□□□□ 0.58
CLN6-204ENST00000564752 WRAP53Q9BUR4 548 aaKnown RBP18.66■□□□□ 0.58
CLN6-204ENST00000564752 SLC13A1Q9BZW2 595 aa18.66■□□□□ 0.58
CLN6-204ENST00000564752 THAP2Q9H0W7 228 aa18.66■□□□□ 0.58
CLN6-204ENST00000564752 LRRC19Q9H756 370 aa18.66■□□□□ 0.58
CLN6-204ENST00000564752 PDFQ9HBH1 243 aa18.66■□□□□ 0.58
CLN6-204ENST00000564752 UBA2Q9UBT2 640 aaPredicted RBP18.66■□□□□ 0.58
CLN6-204ENST00000564752 A0A087X0T9 212 aa18.65■□□□□ 0.58
CLN6-204ENST00000564752 TSPAN11A1L157 253 aa18.65■□□□□ 0.58
CLN6-204ENST00000564752 LMO7DNF2Z398 122 aa18.65■□□□□ 0.58
CLN6-204ENST00000564752 PIGNO95427 931 aa18.65■□□□□ 0.58
CLN6-204ENST00000564752 FAM228BP0C875 321 aa18.65■□□□□ 0.58
CLN6-204ENST00000564752 PCK1P35558 622 aa18.65■□□□□ 0.58
CLN6-204ENST00000564752 NDST2P52849 883 aa18.65■□□□□ 0.58
CLN6-204ENST00000564752 ELP6Q0PNE2 266 aa18.65■□□□□ 0.58
CLN6-204ENST00000564752 GRM3Q14832 879 aa18.65■□□□□ 0.58
CLN6-204ENST00000564752 UGP2Q16851 508 aa18.65■□□□□ 0.58
CLN6-204ENST00000564752 FAXCQ5TGI0 409 aa18.65■□□□□ 0.58
CLN6-204ENST00000564752 CYP4V2Q6ZWL3 525 aaPredicted RBP18.65■□□□□ 0.58
CLN6-204ENST00000564752 ZNF248Q8NDW4 579 aa18.65■□□□□ 0.58
CLN6-204ENST00000564752 GLMNQ92990 594 aa18.65■□□□□ 0.58
CLN6-204ENST00000564752 GRAMD1AQ96CP6 724 aa18.65■□□□□ 0.58
CLN6-204ENST00000564752 CELF6Q96J87 481 aaKnown RBP18.65■□□□□ 0.58
CLN6-204ENST00000564752 EXOC2Q96KP1 924 aa18.65■□□□□ 0.58
CLN6-204ENST00000564752 LRRC61Q9BV99 259 aa18.65■□□□□ 0.58
CLN6-204ENST00000564752 CLPBQ9H078 707 aa18.65■□□□□ 0.58
CLN6-204ENST00000564752 SUV39H2Q9H5I1 410 aa18.65■□□□□ 0.58
CLN6-204ENST00000564752 KALRNO60229 2985 aa18.65■□□□□ 0.58
CLN6-204ENST00000564752 TMEM110-MUSTN1A8MSY1 372 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 J3KR12 359 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 TK2O00142 265 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 YY2O15391 372 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 BUB1BO60566 1050 aaPredicted RBP18.64■□□□□ 0.57
CLN6-204ENST00000564752 PRAMEF11O60813 436 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 ZIC2O95409 532 aaPredicted RBP18.64■□□□□ 0.57
CLN6-204ENST00000564752 ANXA6P08133 673 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 TSHRP16473 764 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 XPAP23025 273 aaPredicted RBP18.64■□□□□ 0.57
CLN6-204ENST00000564752 RPIAP49247 311 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 PEX5P50542 639 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 ZNF135P52742 658 aaPredicted RBP18.64■□□□□ 0.57
CLN6-204ENST00000564752 PCBP4P57723 403 aaKnown RBP18.64■□□□□ 0.57
CLN6-204ENST00000564752 ERVPABLB-1P60509 514 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 PPARDQ03181 441 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 TRIM14Q14142 442 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 PIGHQ14442 188 aaPredicted RBP18.64■□□□□ 0.57
CLN6-204ENST00000564752 LRRC14Q15048 493 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 IRF4Q15306 451 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 WSCD2Q2TBF2 565 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 PERM1Q5SV97 790 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 C6orf132Q5T0Z8 1188 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 ALKBH5Q6P6C2 394 aaKnown RBP18.64■□□□□ 0.57
CLN6-204ENST00000564752 SLC35F3Q8IY50 421 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 ZNF641Q96N77 438 aaPredicted RBP18.64■□□□□ 0.57
CLN6-204ENST00000564752 LGMNQ99538 433 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 NUP85Q9BW27 656 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 ZWILCHQ9H900 591 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 PCDH12Q9NPG4 1184 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 ANAPC7Q9UJX3 599 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 COQ6Q9Y2Z9 468 aa18.64■□□□□ 0.57
CLN6-204ENST00000564752 ARHGAP42A6NI28 874 aa18.63■□□□□ 0.57
CLN6-204ENST00000564752 MUSKO15146 869 aa18.63■□□□□ 0.57
CLN6-204ENST00000564752 ATXN7O15265 892 aaPredicted RBP18.63■□□□□ 0.57
CLN6-204ENST00000564752 ERCC2P18074 760 aa18.63■□□□□ 0.57
CLN6-204ENST00000564752 SMTNL2Q2TAL5 461 aa18.63■□□□□ 0.57
CLN6-204ENST00000564752 CCDC122Q5T0U0 273 aa18.63■□□□□ 0.57
CLN6-204ENST00000564752 SPECC1LQ69YQ0 1117 aa18.63■□□□□ 0.57
CLN6-204ENST00000564752 BRAT1Q6PJG6 821 aa18.63■□□□□ 0.57
CLN6-204ENST00000564752 IGF2-ASQ6U949 168 aa18.63■□□□□ 0.57
CLN6-204ENST00000564752 GPR155Q7Z3F1 870 aa18.63■□□□□ 0.57
CLN6-204ENST00000564752 RNF214Q8ND24 703 aa18.63■□□□□ 0.57
CLN6-204ENST00000564752 LSM14AQ8ND56 463 aaKnown RBP18.63■□□□□ 0.57
CLN6-204ENST00000564752 SLC39A8Q9C0K1 460 aa18.63■□□□□ 0.57
CLN6-204ENST00000564752 ASCL3Q9NQ33 180 aa18.63■□□□□ 0.57
CLN6-204ENST00000564752 IP6K2Q9UHH9 426 aa18.63■□□□□ 0.57
CLN6-204ENST00000564752 MGAQ8IWI9 3026 aa18.63■□□□□ 0.57
CLN6-204ENST00000564752 A0A1W2PNU3 283 aaPredicted RBP18.62■□□□□ 0.57
CLN6-204ENST00000564752 H3BRJ5 948 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 TCEA3O75764 348 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 PRB1P04280 392 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 CYP1A2P05177 515 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 C6P13671 934 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 IL1R2P27930 398 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 HNRNPH3P31942 346 aaKnown RBP18.62■□□□□ 0.57
CLN6-204ENST00000564752 ARL4AP40617 200 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 CSNK1DP48730 415 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 PAPOLAP51003 745 aaKnown RBP18.62■□□□□ 0.57
CLN6-204ENST00000564752 BLKP51451 505 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 HK3P52790 923 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms