RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 PI4KAP42356 2102 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 TCRBV7S2A1N4TA0A589 114 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 CFAP69A5D8W1 941 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 IGLON5A6NGN9 336 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 USP27XA6NNY8 438 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 LZTS3O60299 673 aaPredicted RBP16.08■□□□□ 0.16
RAB40C-208ENST00000564703 MMP20O60882 483 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 TM7SF2O76062 418 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 PAK4O96013 591 aaPredicted RBP16.08■□□□□ 0.16
RAB40C-208ENST00000564703 FGGP02679 453 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 CYP2A6P11509 494 aaPredicted RBP16.08■□□□□ 0.16
RAB40C-208ENST00000564703 ITIH2P19823 946 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 AKT2P31751 481 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 ACTN2P35609 894 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 AFF3P51826 1226 aaKnown RBP16.08■□□□□ 0.16
RAB40C-208ENST00000564703 ATXN3P54252 364 aaPredicted RBP16.08■□□□□ 0.16
RAB40C-208ENST00000564703 RPL26P61254 145 aaKnown RBP16.08■□□□□ 0.16
RAB40C-208ENST00000564703 RACK1P63244 317 aaKnown RBP16.08■□□□□ 0.16
RAB40C-208ENST00000564703 IRX4P78413 519 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 TRAF2Q12933 501 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 PRPSAP1Q14558 356 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 ZNF284Q2VY69 593 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 TMEM52BQ4KMG9 183 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 SLC23A3Q6PIS1 610 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 USP45Q70EL2 814 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 KIAA2013Q8IYS2 634 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 ZNF567Q8N184 647 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 RMDN1Q96DB5 314 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 IFT43Q96FT9 208 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 IMP4Q96G21 291 aaKnown RBP16.08■□□□□ 0.16
RAB40C-208ENST00000564703 RBM15Q96T37 977 aaKnown RBP eCLIP16.08■□□□□ 0.16
RAB40C-208ENST00000564703 NAP1L3Q99457 506 aaPredicted RBP16.08■□□□□ 0.16
RAB40C-208ENST00000564703 WRAP53Q9BUR4 548 aaKnown RBP16.08■□□□□ 0.16
RAB40C-208ENST00000564703 PCDH9Q9HC56 1237 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 HOMER3Q9NSC5 361 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 RSPH14Q9UHP6 348 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 RPL26L1Q9UNX3 145 aaKnown RBP16.08■□□□□ 0.16
RAB40C-208ENST00000564703 ZNF148Q9UQR1 794 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 ITM2BQ9Y287 266 aa16.08■□□□□ 0.16
RAB40C-208ENST00000564703 GPR179Q6PRD1 2367 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 EP300Q09472 2414 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-208ENST00000564703 HNRNPA2B1P22626 353 aaKnown RBP16.07■□□□□ 0.16
RAB40C-208ENST00000564703 CD38P28907 300 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 CSNK1EP49674 416 aaKnown RBP16.07■□□□□ 0.16
RAB40C-208ENST00000564703 C21orf59P57076 290 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 SKOR1P84550 965 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 ARHGEF7Q14155 803 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 SF3A2Q15428 464 aaKnown RBP16.07■□□□□ 0.16
RAB40C-208ENST00000564703 AASDHQ4L235 1098 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-208ENST00000564703 ANKRD20A2Q5SQ80 823 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 ANKRD20A1Q5TYW2 823 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 ANKRD20A3Q5VUR7 823 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 PEAR1Q5VY43 1037 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-208ENST00000564703 SEL1L3Q68CR1 1132 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 NAPEPLDQ6IQ20 393 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 PRR23CQ6ZRP0 262 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 KDELC2Q7Z4H8 507 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 ZSWIM9Q86XI8 627 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 ASB12Q8WXK4 309 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 SPOCK2Q92563 424 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 LRRC45Q96CN5 670 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 TRIM44Q96DX7 344 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-208ENST00000564703 SCRN2Q96FV2 425 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 NSMCE3Q96MG7 304 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 PPP1R2P1Q96PQ5 205 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 C1QTNF2Q9BXJ5 285 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 TDRD1Q9BXT4 1180 aaKnown RBP16.07■□□□□ 0.16
RAB40C-208ENST00000564703 SMOC1Q9H4F8 434 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 TM9SF3Q9HD45 589 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 FAM153AQ9UHL3 310 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 ZFR2Q9UPR6 939 aaKnown RBP16.07■□□□□ 0.16
RAB40C-208ENST00000564703 R3HDM2Q9Y2K5 976 aaKnown RBP16.07■□□□□ 0.16
RAB40C-208ENST00000564703 ZKSCAN5Q9Y2L8 839 aa16.07■□□□□ 0.16
RAB40C-208ENST00000564703 FAM186AA6NE01 2351 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 A8MX80 341 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 PATE3B3GLJ2 98 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 MAGEC1O60732 1142 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 PMPCBO75439 489 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 ANXA9O76027 345 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 ATP1A1P05023 1023 aaKnown RBP16.06■□□□□ 0.16
RAB40C-208ENST00000564703 PRKCGP05129 697 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 PDHA1P08559 390 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 PRLRP16471 622 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 NFKB1P19838 968 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 LIG3P49916 1009 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 CDK18Q07002 472 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 SNX1Q13596 522 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 PCSK7Q16549 785 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 CCNG2Q16589 344 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 TMEM259Q4ZIN3 620 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 FAM71DQ8N9W8 422 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 LPCAT1Q8NF37 534 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 SPATA22Q8NHS9 363 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 C1orf216Q8TAB5 229 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 SLC35B2Q8TB61 432 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 FAM174AQ8TBP5 190 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 PIH1D2Q8WWB5 315 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 C1orf54Q8WWF1 131 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 FCRL5Q96RD9 977 aa16.06■□□□□ 0.16
RAB40C-208ENST00000564703 TMEM121Q9BTD3 319 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms