RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 DEFB133Q30KQ1 61 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 TPRG1LQ5T0D9 272 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 ARFGAP1Q8N6T3 406 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 SPOCK2Q92563 424 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 SYN2Q92777 582 aaPredicted RBP12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 ECHDC3Q96DC8 303 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 IQCDQ96DY2 449 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 UBL7Q96S82 380 aaPredicted RBP12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 WRAP53Q9BUR4 548 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 SNRNP25Q9BV90 132 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 CINPQ9BW66 212 aaPredicted RBP12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 ISCUQ9H1K1 167 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 POLR1BQ9H9Y6 1135 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 TMEM63CQ9P1W3 806 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 CNOT8Q9UFF9 292 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 PCSK1NQ9UHG2 260 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 ATP8A1Q9Y2Q0 1164 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 IGSF10Q6WRI0 2623 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 EIF4E1BA6NMX2 242 aaKnown RBP12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 H3BRJ5 948 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 TMX2-CTNND1H3BSU7 103 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 DDX3XO00571 662 aaKnown RBP eCLIP12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 TNFRSF10CO14798 259 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 USP12O75317 370 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 CSO75390 466 aaKnown RBP12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 RASGRP1O95267 797 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 PIGNO95427 931 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 SERPINC1P01008 464 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 C6P13671 934 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 CTSEP14091 401 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 TSHRP16473 764 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 ITIH2P19823 946 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 MMP12P39900 470 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 MLLT3P42568 568 aaPredicted RBP12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 AP1S1P61966 158 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 TPM4P67936 248 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 MTM1Q13496 603 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 PIGHQ14442 188 aaPredicted RBP12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 INPP5AQ14642 412 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 NFATC4Q14934 902 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 IRF4Q15306 451 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 CDKN3Q16667 212 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 CA9Q16790 459 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 PPP6R3Q5H9R7 873 aaPredicted RBP12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 RALGPS1Q5JS13 557 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 RBM44Q6ZP01 1051 aaKnown RBP12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 EFL1Q7Z2Z2 1120 aaKnown RBP12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 GKN2Q86XP6 184 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 CAMK1DQ8IU85 385 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 LRRC49Q8IUZ0 686 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 ARHGAP12Q8IWW6 846 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 ZNF248Q8NDW4 579 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 CELF6Q96J87 481 aaKnown RBP12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 EXOC2Q96KP1 924 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 PSKH2Q96QS6 385 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 KCTD15Q96SI1 283 aaPredicted RBP12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 APOOQ9BUR5 198 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 LRRC61Q9BV99 259 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 DPH1Q9BZG8 443 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 PRORYQ9H606 182 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 SP110Q9HB58 689 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 THSD1Q9NS62 852 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 GPATCH2LQ9NWQ4 482 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 CWC15Q9P013 229 aaKnown RBP12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 SEPT3Q9UH03 358 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 PADI4Q9UM07 663 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 DOLKQ9UPQ8 538 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 DGKBQ9Y6T7 804 aa12.27□□□□□ -0.45
GTF3C1-204ENST00000564664 A0A1W2PQJ5 194 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 DFFAO00273 331 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 PDE2AO00408 941 aaPredicted RBP12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 LRCH4O75427 683 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 TNFP01375 233 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 MYF5P13349 255 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 HOXB3P14651 431 aaPredicted RBP12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 TGM2P21980 687 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 KELP23276 732 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 RBMS1P29558 406 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 ARL4AP40617 200 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 UCNP55089 124 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 PCBP4P57723 403 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 SRP54P61011 504 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 COL9A2Q14055 689 aaPredicted RBP12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 DPYSQ14117 519 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 DPYSL2Q16555 572 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 LRRC73Q5JTD7 316 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 GUSBP11Q6P575 273 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 ENPP7Q6UWV6 458 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 RBFAQ8N0V3 343 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 BBS5Q8N3I7 341 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 ARL10Q8N8L6 244 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 NETO2Q8NC67 525 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 TSEN2Q8NCE0 465 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 TEKT4Q8WW24 435 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 ZNF653Q96CK0 615 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 CCDC97Q96F63 343 aaPredicted RBP12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 HIC2Q96JB3 615 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 WDR92Q96MX6 357 aa12.26□□□□□ -0.45
GTF3C1-204ENST00000564664 NAP1L5Q96NT1 182 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms