RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 WSCD2Q2TBF2 565 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 ZSCAN23Q3MJ62 389 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 CCDC122Q5T0U0 273 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 TMCO4Q5TGY1 634 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 TXNRD3NBQ6F5E7 133 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 LZTR1Q8N653 840 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 IFI44Q8TCB0 444 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 HCAR2Q8TDS4 363 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 CSPG4P5Q96PW8 444 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 ABCG4Q9H172 646 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 SEPT3Q9UH03 358 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 IP6K2Q9UHH9 426 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 PNMA8BQ9ULN7 279 aaPredicted RBP17.81■□□□□ 0.44
NME3-205ENST00000563854 CSNK1G3Q9Y6M4 447 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 ANKRD11Q6UB99 2663 aaPredicted RBP17.81■□□□□ 0.44
NME3-205ENST00000563854 DSPP15924 2871 aaKnown RBP17.81■□□□□ 0.44
NME3-205ENST00000563854 LY6G6EA0A0G2JKS1 128 aa17.8■□□□□ 0.44
NME3-205ENST00000563854 A8MX80 341 aa17.8■□□□□ 0.44
NME3-205ENST00000563854 OPA1O60313 960 aa17.8■□□□□ 0.44
NME3-205ENST00000563854 GCATO75600 419 aa17.8■□□□□ 0.44
NME3-205ENST00000563854 CSNK1DP48730 415 aa17.8■□□□□ 0.44
NME3-205ENST00000563854 ADKP55263 362 aaKnown RBP17.8■□□□□ 0.44
NME3-205ENST00000563854 PPARDQ03181 441 aa17.8■□□□□ 0.44
NME3-205ENST00000563854 SLC10A7Q0GE19 358 aa17.8■□□□□ 0.44
NME3-205ENST00000563854 BOLA3Q53S33 107 aa17.8■□□□□ 0.44
NME3-205ENST00000563854 GUSBP11Q6P575 273 aa17.8■□□□□ 0.44
NME3-205ENST00000563854 CRTC1Q6UUV9 634 aa17.8■□□□□ 0.44
NME3-205ENST00000563854 EFL1Q7Z2Z2 1120 aaKnown RBP17.8■□□□□ 0.44
NME3-205ENST00000563854 RD3Q7Z3Z2 195 aa17.8■□□□□ 0.44
NME3-205ENST00000563854 POLNQ7Z5Q5 900 aa17.8■□□□□ 0.44
NME3-205ENST00000563854 HID1Q8IV36 788 aa17.8■□□□□ 0.44
NME3-205ENST00000563854 ATPAF2Q8N5M1 289 aa17.8■□□□□ 0.44
NME3-205ENST00000563854 MAPK15Q8TD08 544 aa17.8■□□□□ 0.44
NME3-205ENST00000563854 PDCD6IPQ8WUM4 868 aaKnown RBP17.8■□□□□ 0.44
NME3-205ENST00000563854 RFFLQ8WZ73 363 aa17.8■□□□□ 0.44
NME3-205ENST00000563854 LRRC61Q9BV99 259 aa17.8■□□□□ 0.44
NME3-205ENST00000563854 PCDH18Q9HCL0 1135 aa17.8■□□□□ 0.44
NME3-205ENST00000563854 DOLKQ9UPQ8 538 aa17.8■□□□□ 0.44
NME3-205ENST00000563854 OR1A2Q9Y585 309 aa17.8■□□□□ 0.44
NME3-205ENST00000563854 U3KQA8 63 aa17.8■□□□□ 0.44
NME3-205ENST00000563854 ANKRD36A6QL64 1941 aa17.79■□□□□ 0.44
NME3-205ENST00000563854 MYLKQ15746 1914 aa17.79■□□□□ 0.44
NME3-205ENST00000563854 ANXA6P08133 673 aa17.79■□□□□ 0.44
NME3-205ENST00000563854 ELFN1P0C7U0 828 aa17.79■□□□□ 0.44
NME3-205ENST00000563854 CASP14P31944 242 aa17.79■□□□□ 0.44
NME3-205ENST00000563854 RENBPP51606 427 aa17.79■□□□□ 0.44
NME3-205ENST00000563854 CDH6P55285 790 aa17.79■□□□□ 0.44
NME3-205ENST00000563854 AP1S1P61966 158 aa17.79■□□□□ 0.44
NME3-205ENST00000563854 SLC25A11Q02978 314 aaKnown RBP17.79■□□□□ 0.44
NME3-205ENST00000563854 INPP5AQ14642 412 aa17.79■□□□□ 0.44
NME3-205ENST00000563854 NR0B2Q15466 257 aa17.79■□□□□ 0.44
NME3-205ENST00000563854 ALKBH5Q6P6C2 394 aaKnown RBP17.79■□□□□ 0.44
NME3-205ENST00000563854 ENPP7Q6UWV6 458 aa17.79■□□□□ 0.44
NME3-205ENST00000563854 DCBLD1Q8N8Z6 715 aa17.79■□□□□ 0.44
NME3-205ENST00000563854 FAM181AQ8N9Y4 354 aa17.79■□□□□ 0.44
NME3-205ENST00000563854 TSACCQ96A04 125 aaPredicted RBP17.79■□□□□ 0.44
NME3-205ENST00000563854 IQCDQ96DY2 449 aa17.79■□□□□ 0.44
NME3-205ENST00000563854 XPO4Q9C0E2 1151 aaKnown RBP17.79■□□□□ 0.44
NME3-205ENST00000563854 SYNDIG1Q9H7V2 258 aa17.79■□□□□ 0.44
NME3-205ENST00000563854 USP29Q9HBJ7 922 aa17.79■□□□□ 0.44
NME3-205ENST00000563854 PCDHB1Q9Y5F3 818 aa17.79■□□□□ 0.44
NME3-205ENST00000563854 LRRK1Q38SD2 2015 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 MYO1FO00160 1098 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 TOR1BO14657 336 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 CYP1A2P05177 515 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 TPM3P06753 285 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 CELA2BP08218 269 aaPredicted RBP17.78■□□□□ 0.44
NME3-205ENST00000563854 CTSEP14091 401 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 TSHRP16473 764 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 PTMSP20962 102 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 HTR1BP28222 390 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 SERPINB6P35237 376 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 MAXP61244 160 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 RALGDSQ12967 914 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 MMRN1Q13201 1228 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 NFATC4Q14934 902 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 NYAP1Q6ZVC0 841 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 BBS5Q8N3I7 341 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 NIPA2Q8N8Q9 360 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 ZNF564Q8TBZ8 553 aaPredicted RBP17.78■□□□□ 0.44
NME3-205ENST00000563854 NSMCE1Q8WV22 266 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 TEKT4Q8WW24 435 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 ZNF599Q96NL3 588 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 DEPDC7Q96QD5 511 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 PSKH2Q96QS6 385 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 APOOQ9BUR5 198 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 NRSN2Q9GZP1 204 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 SCUBE2Q9NQ36 999 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 NCKIPSDQ9NZQ3 722 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 SIRPGQ9P1W8 387 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 KLQ9UEF7 1012 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 APC2O95996 2303 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 ADAMTS20P59510 1910 aa17.78■□□□□ 0.44
NME3-205ENST00000563854 BRINP1O60477 761 aa17.77■□□□□ 0.44
NME3-205ENST00000563854 CSO75390 466 aaKnown RBP17.77■□□□□ 0.44
NME3-205ENST00000563854 RECQL5O94762 991 aaPredicted RBP17.77■□□□□ 0.44
NME3-205ENST00000563854 CPP00450 1065 aa17.77■□□□□ 0.44
NME3-205ENST00000563854 GP1BAP07359 652 aa17.77■□□□□ 0.44
NME3-205ENST00000563854 BLKP51451 505 aa17.77■□□□□ 0.44
NME3-205ENST00000563854 POLR2LP62875 67 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms