RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 ZNF8P17098 575 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 ITGAXP20702 1163 aa3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 TRAPPC10P48553 1259 aa3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 BLKP51451 505 aa3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 ZNF132P52740 706 aa3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 TNFAIP1Q13829 316 aa3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 RBBP5Q15291 538 aaKnown RBP3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 OASLQ15646 514 aaKnown RBP3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 AMZ1Q400G9 498 aa3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 ANKRD45Q5TZF3 282 aa3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 ANO1Q5XXA6 986 aa3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 ZNF449Q6P9G9 518 aa3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 TBC1D26Q86UD7 250 aa3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 C2CD5Q86YS7 1000 aa3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 ENAHQ8N8S7 591 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 MAB21L3Q8N8X9 362 aa3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 KBTBD3Q8NAB2 608 aa3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 STAMQ92783 540 aa3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 TANKQ92844 425 aa3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 OTULINQ96BN8 352 aa3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 UHRF2Q96PU4 802 aa3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 NOD2Q9HC29 1040 aa3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 CISD1Q9NZ45 108 aaKnown RBP3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 SIX4Q9UIU6 781 aa3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 ADAM18Q9Y3Q7 739 aa3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 A0A0G2JPF8 293 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 HNRNPCL3B7ZW38 293 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 SOCS6O14544 535 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 HNRNPCL1O60812 293 aaKnown RBP3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 NDUFB4O95168 129 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 HNRNPCL4P0DMR1 293 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 EDN2P20800 178 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 HNRNPH1P31943 449 aaKnown RBP3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 GRK6P43250 576 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 CLDN2P57739 230 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 YWHAZP63104 245 aaKnown RBP3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 ECT2LQ008S8 904 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 TROAPQ12815 778 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 NAA25Q14CX7 972 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 ANKRD1Q15327 319 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 ATP13A5Q4VNC0 1218 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 FOXL2NBQ6ZUU3 175 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 SATL1Q86VE3 508 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 IL17RCQ8NAC3 791 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 SPATA22Q8NHS9 363 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 FIG4Q92562 907 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 SNAPC3Q92966 411 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 ZC3HAV1LQ96H79 300 aaKnown RBP3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 FEM1CQ96JP0 617 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 TWNKQ96RR1 684 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 NUF2Q9BZD4 464 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 MMP28Q9H239 520 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 ALKBH4Q9NXW9 302 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 KCNS2Q9ULS6 477 aa3.34□□□□□ -1.87
HMGB1P33-201ENST00000563485 ZNF587BE7ETH6 402 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 MID1O15344 667 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 IRAK2O43187 625 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 KLK8O60259 260 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 CGAP01215 116 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 CRYAAP02489 173 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 SLC2A4P14672 509 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 PTPN2P17706 415 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 KCNA5P22460 613 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 FUT6P51993 359 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 NR1H2P55055 460 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 ZNF667Q5HYK9 610 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 C10orf62Q5T681 223 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 LRRC8EQ6NSJ5 796 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 FBXL22Q6P050 247 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 WDR73Q6P4I2 378 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 GDPD4Q6W3E5 623 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 B3GNT6Q6ZMB0 384 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 NOL8Q76FK4 1167 aaKnown RBP3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 NOXA1Q86UR1 476 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 FAM160B2Q86V87 743 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 SFR1Q86XK3 245 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 KIAA2013Q8IYS2 634 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 LSM14AQ8ND56 463 aaKnown RBP3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 TMEM19Q96HH6 336 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 CD180Q99467 661 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 ITM2CQ9NQX7 267 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 CTNNAL1Q9UBT7 734 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 VDAC3Q9Y277 283 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 NFE2L3Q9Y4A8 694 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 PSAT1Q9Y617 370 aa3.33□□□□□ -1.88
HMGB1P33-201ENST00000563485 PLRG1O43660 514 aaKnown RBP3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 PCNAP12004 261 aa3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 CHATP28329 748 aa3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 PAPOLAP51003 745 aaKnown RBP3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 CLCN3P51790 818 aa3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 RHBDL3P58872 404 aa3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 CHRNDQ07001 517 aa3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 TBL3Q12788 808 aaKnown RBP3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 MMEL1Q495T6 779 aa3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 PPP6R3Q5H9R7 873 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 MARK2Q7KZI7 788 aaKnown RBP3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 CIARTQ8N365 385 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 USP38Q8NB14 1042 aa3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 LNX1Q8TBB1 728 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 LRRC8CQ8TDW0 803 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms