RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 ADGRE3Q9BY15 652 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 SUV39H2Q9H5I1 410 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 ACSS3Q9H6R3 686 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 C8orf33Q9H7E9 229 aaPredicted RBP10.23□□□□□ -0.77
SMG1-208ENST00000563448 FAM50BQ9Y247 325 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 TCAF1Q9Y4C2 921 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 RPS6KL1Q9Y6S9 549 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 PIAS3Q9Y6X2 628 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 FAM169AQ9Y6X4 670 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 ZCWPW2A0A1B0GU75 182 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 SHISA7A6NL88 538 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 SIN3BO75182 1162 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 ALDH1A2O94788 518 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 SYF2O95926 243 aaKnown RBP10.23□□□□□ -0.77
SMG1-208ENST00000563448 POLBP06746 335 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 CHRM1P11229 460 aaPredicted RBP10.23□□□□□ -0.77
SMG1-208ENST00000563448 HNRNPLP14866 589 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMG1-208ENST00000563448 PRKCHP24723 683 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 GCAP28676 217 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 RECQLP46063 649 aaPredicted RBP10.23□□□□□ -0.77
SMG1-208ENST00000563448 IFFO1Q0D2I5 559 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 SEPT6Q14141 434 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 STAT4Q14765 748 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 GRM3Q14832 879 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 EFTUD2Q15029 972 aaKnown RBP eCLIP10.23□□□□□ -0.777e-8■■■□□ 17.3
SMG1-208ENST00000563448 PON2Q15165 354 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 LONRF1Q17RB8 773 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 HNRNPA1L2Q32P51 320 aaKnown RBP10.23□□□□□ -0.77
SMG1-208ENST00000563448 NUDT18Q6ZVK8 323 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 MDGA1Q8NFP4 955 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 BLOC1S5Q8TDH9 187 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 EPS8L3Q8TE67 593 aaKnown RBP10.23□□□□□ -0.77
SMG1-208ENST00000563448 ECHDC3Q96DC8 303 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 RUFY1Q96T51 708 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 TMEM109Q9BVC6 243 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 ACBD3Q9H3P7 528 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 MOCS1Q9NZB8 636 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 IL36AQ9UHA7 158 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 KCTD3Q9Y597 815 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 F5P12259 2224 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 PLXNA2O75051 1894 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 EDDM13A0A1B0GTR0 161 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 HEATR9A2RTY3 570 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 LDB2O43679 373 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 LEFTY1O75610 366 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 PIAS1O75925 651 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 EGFP01133 1207 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 UGT2B4P06133 528 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 SRFP11831 508 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 CTPS1P17812 591 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 STX2P32856 288 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 KIR2DL1P43626 348 aaPredicted RBP10.22□□□□□ -0.77
SMG1-208ENST00000563448 GRIA4P48058 902 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 TDGQ13569 410 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 ENPP2Q13822 863 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 KBTBD12Q3ZCT8 623 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 ARSIQ5FYB1 569 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 TMEM196Q5HYL7 178 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 C9orf64Q5T6V5 341 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 ARMC3Q5W041 872 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 FSTL4Q6MZW2 842 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 ESRP1Q6NXG1 681 aaKnown RBP10.22□□□□□ -0.77
SMG1-208ENST00000563448 SERPINA13PQ6UXR4 307 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 GDPD4Q6W3E5 623 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.22□□□□□ -0.77
SMG1-208ENST00000563448 GRIN3AQ8TCU5 1115 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 BRSK1Q8TDC3 778 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 PTCD2Q8WV60 388 aaKnown RBP10.22□□□□□ -0.77
SMG1-208ENST00000563448 ZNF641Q96N77 438 aaPredicted RBP10.22□□□□□ -0.77
SMG1-208ENST00000563448 KLHL32Q96NJ5 620 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 SH3GL2Q99962 352 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 SLC2A4RGQ9NR83 387 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 SMYD2Q9NRG4 433 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 TREX1Q9NSU2 369 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 CACNA2D2Q9NY47 1150 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 IL1RAPL1Q9NZN1 696 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 SLC2A6Q9UGQ3 507 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 DOCK9Q9BZ29 2069 aa10.22□□□□□ -0.77
SMG1-208ENST00000563448 A0A0J9YYE9 177 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 EXOC1LA0A1B0GW35 172 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 MROH6A6NGR9 719 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 CXorf49A8MYA2 514 aaPredicted RBP10.21□□□□□ -0.77
SMG1-208ENST00000563448 POC1B-GALNT4F8VUJ3 575 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 AURKAO14965 403 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 TCEA3O75764 348 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 TRBC1P01850 177 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 ALPIP09923 528 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 ABL2P42684 1182 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 EPHB1P54762 984 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 SEC13P55735 322 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 RPL26P61254 145 aaKnown RBP10.21□□□□□ -0.77
SMG1-208ENST00000563448 FRG1Q14331 258 aaKnown RBP10.21□□□□□ -0.77
SMG1-208ENST00000563448 PTPRCAPQ14761 206 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 TSTD2Q5T7W7 516 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 MICALCLQ6ZW33 695 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 CYS1Q717R9 158 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 STK40Q8N2I9 435 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 ZNF513Q8N8E2 541 aaPredicted RBP10.21□□□□□ -0.77
SMG1-208ENST00000563448 LRIG1Q96JA1 1093 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 FAM129BQ96TA1 746 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms