RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 SETMARQ53H47 684 aaPredicted RBP8.61□□□□□ -1.03
UBR1-204ENST00000563239 ODF2Q5BJF6 829 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 RALGPS1Q5JS13 557 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 NAPEPLDQ6IQ20 393 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 KIAA1161Q6NSJ0 714 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 KDM7AQ6ZMT4 941 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 GCNT7Q6ZNI0 430 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 SPATS2Q86XZ4 545 aaKnown RBP8.61□□□□□ -1.03
UBR1-204ENST00000563239 CCDC50Q8IVM0 306 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 SYCE1Q8N0S2 351 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 NETO1Q8TDF5 533 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 NSMCE1Q8WV22 266 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 PIH1D2Q8WWB5 315 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 ASB12Q8WXK4 309 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 TADA1Q96BN2 335 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 HAUS1Q96CS2 278 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 FEM1CQ96JP0 617 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 SERAC1Q96JX3 654 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 BMFQ96LC9 184 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 ZNF830Q96NB3 372 aaPredicted RBP8.61□□□□□ -1.03
UBR1-204ENST00000563239 SMIM14Q96QK8 99 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 SLC17A9Q9BYT1 436 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 CEP41Q9BYV8 373 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 POLR1EQ9GZS1 481 aaKnown RBP8.61□□□□□ -1.03
UBR1-204ENST00000563239 BRD8Q9H0E9 1235 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 C10orf88Q9H8K7 445 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 IL21RQ9HBE5 538 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 FZD3Q9NPG1 666 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 LZTFL1Q9NQ48 299 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 AMACRQ9UHK6 382 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 ANKRD6Q9Y2G4 727 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 SNX11Q9Y5W9 270 aa8.61□□□□□ -1.03
UBR1-204ENST00000563239 CFAP47Q6ZTR5 3102 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 TCRBV7S2A1N4TA0A589 114 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 PRAMEF26H0Y7S4 382 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 H0Y8X5 98 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 APOC4-APOC2K7ER74 178 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 TLR4O00206 839 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 KCNK3O14649 394 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 PPP1R12AO14974 1030 aaPredicted RBP8.6□□□□□ -1.03
UBR1-204ENST00000563239 KRT86O43790 486 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 PGLSO95336 258 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 PAK4O96013 591 aaPredicted RBP8.6□□□□□ -1.03
UBR1-204ENST00000563239 APOC2P02655 101 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 SYPP08247 313 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 PTPN3P26045 913 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 CD38P28907 300 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 CD68P34810 354 aaPredicted RBP8.6□□□□□ -1.03
UBR1-204ENST00000563239 CLDN2P57739 230 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 NXPH1P58417 271 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 SKOR1P84550 965 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 KLF1Q13351 362 aaPredicted RBP8.6□□□□□ -1.03
UBR1-204ENST00000563239 NOMO1Q15155 1222 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 SHBQ15464 509 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 ZNF423Q2M1K9 1284 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 HLA-BQ31612 363 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 TEX44Q53QW1 395 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 MEI1Q5TIA1 1274 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 DPPA4Q7L190 304 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 ABI3BPQ7Z7G0 1075 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 ZC3H18Q86VM9 953 aaKnown RBP8.6□□□□□ -1.03
UBR1-204ENST00000563239 REXO1L1PQ8IX06 675 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 CBARPQ8N350 705 aaPredicted RBP8.6□□□□□ -1.03
UBR1-204ENST00000563239 BBS5Q8N3I7 341 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 MINDY1Q8N5J2 469 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.6□□□□□ -1.03
UBR1-204ENST00000563239 MFSD2AQ8NA29 543 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 ACTL9Q8TC94 416 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 TFB1MQ8WVM0 346 aaKnown RBP8.6□□□□□ -1.03
UBR1-204ENST00000563239 P3H4Q92791 437 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 CENPTQ96BT3 561 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 QKIQ96PU8 341 aaKnown RBP eCLIP8.6□□□□□ -1.034e-8■■■■■ 33.1
UBR1-204ENST00000563239 LENG8Q96PV6 779 aaPredicted RBP8.6□□□□□ -1.03
UBR1-204ENST00000563239 MYOCQ99972 504 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 FAM118BQ9BPY3 351 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 WRAP53Q9BUR4 548 aaKnown RBP8.6□□□□□ -1.03
UBR1-204ENST00000563239 GTPBP2Q9BX10 602 aaKnown RBP8.6□□□□□ -1.03
UBR1-204ENST00000563239 ZDHHC5Q9C0B5 715 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 CAAP1Q9H8G2 361 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 TMEM9BQ9NQ34 198 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 AASDHPPTQ9NRN7 309 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 GPR27Q9NS67 375 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 DNAAF2Q9NVR5 837 aaKnown RBP8.6□□□□□ -1.03
UBR1-204ENST00000563239 FNDC3AQ9Y2H6 1198 aaKnown RBP8.6□□□□□ -1.03
UBR1-204ENST00000563239 PPIL1Q9Y3C6 166 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 PCDHB9Q9Y5E1 797 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 RAI2Q9Y5P3 530 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 ANKRD36A6QL64 1941 aa8.6□□□□□ -1.03
UBR1-204ENST00000563239 A0A0U1RQS6 177 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 CFAP69A5D8W1 941 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 POM121BA6NF01 834 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 HACD1B0YJ81 288 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 NEMP1O14524 444 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 C6P13671 934 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 CD59P13987 128 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 HNRNPA2B1P22626 353 aaKnown RBP8.59□□□□□ -1.03
UBR1-204ENST00000563239 LHCGRP22888 699 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 CES1P23141 567 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 RBL1P28749 1068 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 CD86P42081 329 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms