RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 ADAM15Q13444 863 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 QPCTQ16769 361 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 FSTL4Q6MZW2 842 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 NEPROQ6NW34 567 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 FOXR1Q6PIV2 292 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 METTL3Q86U44 580 aaKnown RBP18.15■□□□□ 0.5
COMMD4-208ENST00000563220 TAX1BP1Q86VP1 789 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.15■□□□□ 0.5
COMMD4-208ENST00000563220 ZNF557Q8N988 423 aaPredicted RBP18.15■□□□□ 0.5
COMMD4-208ENST00000563220 MDGA1Q8NFP4 955 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 OR13C4Q8NGS5 318 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 DYDC1Q8WWB3 177 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 CKAP2Q8WWK9 683 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 HDAC10Q969S8 669 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 VOPP1Q96AW1 172 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 APOPT1Q96IL0 206 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 PAIP2Q9BPZ3 127 aaKnown RBP18.15■□□□□ 0.5
COMMD4-208ENST00000563220 SLC13A1Q9BZW2 595 aa18.15■□□□□ 0.5
COMMD4-208ENST00000563220 TPP1O14773 563 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 ZWINTO95229 277 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 CISD3P0C7P0 127 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 ADH5P11766 374 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 FCARP24071 287 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 TMPRSS15P98073 1019 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 MPP1Q00013 466 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 ECT2LQ008S8 904 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 ACVR1Q04771 509 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 THOC5Q13769 683 aaKnown RBP18.14■□□□□ 0.49
COMMD4-208ENST00000563220 GEN1Q17RS7 908 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 MBLAC2Q68D91 279 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 TANGO2Q6ICL3 276 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 DCLK2Q8N568 766 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 ACVR1CQ8NER5 493 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 PTPRN2Q92932 1015 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 DNAJC1Q96KC8 554 aaKnown RBP18.14■□□□□ 0.49
COMMD4-208ENST00000563220 TBATAQ96M53 351 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 ZNF317Q96PQ6 595 aaPredicted RBP18.14■□□□□ 0.49
COMMD4-208ENST00000563220 ADGRE3Q9BY15 652 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 SLC2A11Q9BYW1 496 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 TRPV4Q9HBA0 871 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 NSMCE4AQ9NXX6 385 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 CLEC1BQ9P126 229 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 PCDHB9Q9Y5E1 797 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 MIA3Q5JRA6 1907 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 TRAFD1O14545 582 aaPredicted RBP18.14■□□□□ 0.49
COMMD4-208ENST00000563220 COPEO14579 308 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 PIGNO95427 931 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 SLC1A2P43004 574 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 PDE1BQ01064 536 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 DMC1Q14565 340 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 LVRNQ6Q4G3 990 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 ZC3HC1Q86WB0 502 aaKnown RBP18.14■□□□□ 0.49
COMMD4-208ENST00000563220 C12orf40Q86WS4 652 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 NDUFAF2Q8N183 169 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 PNPLA1Q8N8W4 532 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 C2CD4AQ8NCU7 369 aaPredicted RBP18.14■□□□□ 0.49
COMMD4-208ENST00000563220 OR2AP1Q8NGE2 309 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 BCAS4Q8TDM0 211 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 EBF3Q9H4W6 596 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 ZNF576Q9H609 170 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 SUDS3Q9H7L9 328 aaPredicted RBP18.14■□□□□ 0.49
COMMD4-208ENST00000563220 PCMTD2Q9NV79 361 aa18.14■□□□□ 0.49
COMMD4-208ENST00000563220 REV3LO60673 3130 aa18.13■□□□□ 0.49
COMMD4-208ENST00000563220 OR51F1A6NGY5 319 aa18.13■□□□□ 0.49
COMMD4-208ENST00000563220 OTOL1A6NHN0 477 aaPredicted RBP18.13■□□□□ 0.49
COMMD4-208ENST00000563220 TM9SF1O15321 606 aa18.13■□□□□ 0.49
COMMD4-208ENST00000563220 HOXC11O43248 304 aaPredicted RBP18.13■□□□□ 0.49
COMMD4-208ENST00000563220 IGSF6O95976 241 aa18.13■□□□□ 0.49
COMMD4-208ENST00000563220 ABL2P42684 1182 aa18.13■□□□□ 0.49
COMMD4-208ENST00000563220 SULT2A1Q06520 285 aa18.13■□□□□ 0.49
COMMD4-208ENST00000563220 DLX2Q07687 328 aaPredicted RBP18.13■□□□□ 0.49
COMMD4-208ENST00000563220 LAMB3Q13751 1172 aa18.13■□□□□ 0.49
COMMD4-208ENST00000563220 ZNF470Q6ECI4 717 aa18.13■□□□□ 0.49
COMMD4-208ENST00000563220 C22orf39Q6P5X5 142 aa18.13■□□□□ 0.49
COMMD4-208ENST00000563220 PTAR1Q7Z6K3 402 aaPredicted RBP18.13■□□□□ 0.49
COMMD4-208ENST00000563220 STYXQ8WUJ0 223 aa18.13■□□□□ 0.49
COMMD4-208ENST00000563220 PIH1D2Q8WWB5 315 aa18.13■□□□□ 0.49
COMMD4-208ENST00000563220 PEX13Q92968 403 aa18.13■□□□□ 0.49
COMMD4-208ENST00000563220 ISG20Q96AZ6 181 aaKnown RBP18.13■□□□□ 0.49
COMMD4-208ENST00000563220 VPS39Q96JC1 886 aa18.13■□□□□ 0.49
COMMD4-208ENST00000563220 SRPK1Q96SB4 655 aaKnown RBP18.13■□□□□ 0.49
COMMD4-208ENST00000563220 CCT8L2Q96SF2 557 aa18.13■□□□□ 0.49
COMMD4-208ENST00000563220 FAM83CQ9BQN1 747 aa18.13■□□□□ 0.49
COMMD4-208ENST00000563220 S1PR5Q9H228 398 aa18.13■□□□□ 0.49
COMMD4-208ENST00000563220 SLC25A13Q9UJS0 675 aa18.13■□□□□ 0.49
COMMD4-208ENST00000563220 CDH7Q9ULB5 785 aa18.13■□□□□ 0.49
COMMD4-208ENST00000563220 RIMKLBQ9ULI2 386 aa18.13■□□□□ 0.49
COMMD4-208ENST00000563220 A0A0U1RQS6 177 aa18.12■□□□□ 0.49
COMMD4-208ENST00000563220 MYO1CO00159 1063 aa18.12■□□□□ 0.49
COMMD4-208ENST00000563220 SLC7A4O43246 635 aa18.12■□□□□ 0.49
COMMD4-208ENST00000563220 HTRA2O43464 458 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-208ENST00000563220 PGLSO95336 258 aa18.12■□□□□ 0.49
COMMD4-208ENST00000563220 TOP3BO95985 862 aaKnown RBP18.12■□□□□ 0.49
COMMD4-208ENST00000563220 FOXN2P32314 431 aa18.12■□□□□ 0.49
COMMD4-208ENST00000563220 ETV4P43268 484 aa18.12■□□□□ 0.49
COMMD4-208ENST00000563220 BCL2L1Q07817 233 aa18.12■□□□□ 0.49
COMMD4-208ENST00000563220 PDE1CQ14123 709 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-208ENST00000563220 GRM3Q14832 879 aa18.12■□□□□ 0.49
COMMD4-208ENST00000563220 TAF1AQ15573 450 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-208ENST00000563220 DLG2Q15700 870 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms