RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 HORMAD2Q8N7B1 307 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 LSMEM1Q8N8F7 131 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 C11orf65Q8NCR3 313 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 ENGASEQ8NFI3 743 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 CADM4Q8NFZ8 388 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 TMEM163Q8TC26 289 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 INPP5DQ92835 1189 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 SAAL1Q96ER3 474 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 NLRP4Q96MN2 994 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 NR1H4Q96RI1 486 aaPredicted RBP3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 SERINC2Q96SA4 455 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 YME1L1Q96TA2 773 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 FOXP1Q9H334 677 aaPredicted RBP3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 SYNCQ9H7C4 482 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 WDR6Q9NNW5 1121 aaKnown RBP3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 SNTG1Q9NSN8 517 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 POT1Q9NUX5 634 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 BCCIPQ9P287 314 aaKnown RBP eCLIP3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 KDM3AQ9Y4C1 1321 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 CD8B2A6NJW9 211 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 A8MV72 311 aaPredicted RBP3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 BTBD18B2RXH4 712 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 STMND1H3BQB6 276 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 TAF4O00268 1085 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 SLC25A17O43808 307 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 OAZ2O95190 189 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 CLDN7O95471 211 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 TOMM40O96008 361 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 GALTP07902 379 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 LAMP2P13473 410 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 PTPN2P17706 415 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 CTPS1P17812 591 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 POU1F1P28069 291 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 ACSL1P33121 698 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 TTKP33981 857 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 AVPR1AP37288 418 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 TERF1P54274 439 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 SELENOVP59797 346 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 YWHAZP63104 245 aaKnown RBP3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 PTGR1Q14914 329 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 EDRF1Q3B7T1 1238 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 LEXMQ3ZCV2 418 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 CCDC184Q52MB2 194 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 ATG9BQ674R7 924 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 HEPHL1Q6MZM0 1159 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 PDXDC1Q6P996 788 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 SLC16A12Q6ZSM3 486 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 RRM2BQ7LG56 351 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 TADA2BQ86TJ2 420 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 PIM3Q86V86 326 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 FAM160B2Q86V87 743 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 TDRPQ86YL5 185 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 RBFAQ8N0V3 343 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 GABPB2Q8TAK5 448 aaPredicted RBP3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 GDPD5Q8WTR4 605 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 LPAR1Q92633 364 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 ZKSCAN4Q969J2 545 aaPredicted RBP3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 SLC25A28Q96A46 364 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 INTS12Q96CB8 462 aaKnown RBP3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 FAM120BQ96EK7 910 aaKnown RBP3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 SLF1Q9BQI6 1058 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 SIL1Q9H173 461 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 POLR1BQ9H9Y6 1135 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 SIRT3Q9NTG7 399 aaPredicted RBP3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 MRGBPQ9NV56 204 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 BABAM1Q9NWV8 329 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 NKIRAS2Q9NYR9 191 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 MPP6Q9NZW5 540 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 KIAA1456Q9P272 454 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 HSPB7Q9UBY9 170 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 TTLL3Q9Y4R7 772 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 PCDHGB5Q9Y5G0 923 aa3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 MAGED1Q9Y5V3 778 aaPredicted RBP3.4□□□□□ -1.87
SHCBP1-202ENST00000563219 IGKV2D-30A0A075B6S6 120 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 A0A0U1RQG5 324 aaPredicted RBP3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 A0A1W2PQ09 198 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 BEST1O76090 585 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 HEXAP06865 529 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 CSH1P0DML2 217 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 CSH2P0DML3 217 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 PSG1P11464 419 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 ARSBP15848 533 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 IL7RP16871 459 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 SCP2P22307 547 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 GNLYP22749 145 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 DCTDP32321 178 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 RYKP34925 604 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 RFC1P35251 1148 aaPredicted RBP3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 FAM27E3Q08E93 113 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 GOLGA8DPQ0D2H9 430 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 BECN1Q14457 450 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 CCDC96Q2M329 555 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 PRTGQ2VWP7 1150 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 PLEKHO1Q53GL0 409 aaPredicted RBP3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 WASHC2DQ5SRD0 308 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 SERTAD4-AS1Q5TG53 156 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 CDC73Q6P1J9 531 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 COLCA1Q6ZS62 124 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms