RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 TWIST1Q15672 202 aa5.8□□□□□ -1.48
LINC00557-201ENST00000563184 FBXO46Q6PJ61 603 aaPredicted RBP5.8□□□□□ -1.48
LINC00557-201ENST00000563184 ZNF367Q7RTV3 350 aa5.8□□□□□ -1.48
LINC00557-201ENST00000563184 PCGF5Q86SE9 256 aa5.8□□□□□ -1.48
LINC00557-201ENST00000563184 PATL1Q86TB9 770 aaKnown RBP5.8□□□□□ -1.48
LINC00557-201ENST00000563184 SFTPA2Q8IWL1 248 aa5.8□□□□□ -1.48
LINC00557-201ENST00000563184 SLC35F3Q8IY50 421 aa5.8□□□□□ -1.48
LINC00557-201ENST00000563184 MB21D2Q8IYB1 491 aaPredicted RBP5.8□□□□□ -1.48
LINC00557-201ENST00000563184 GFM1Q96RP9 751 aaKnown RBP5.8□□□□□ -1.48
LINC00557-201ENST00000563184 MAP7D2Q96T17 732 aa5.8□□□□□ -1.48
LINC00557-201ENST00000563184 TREX2Q9BQ50 279 aaPredicted RBP5.8□□□□□ -1.48
LINC00557-201ENST00000563184 POLR1BQ9H9Y6 1135 aa5.8□□□□□ -1.48
LINC00557-201ENST00000563184 CLK4Q9HAZ1 481 aaKnown RBP5.8□□□□□ -1.48
LINC00557-201ENST00000563184 ASAH2Q9NR71 780 aa5.8□□□□□ -1.48
LINC00557-201ENST00000563184 SMYD2Q9NRG4 433 aa5.8□□□□□ -1.48
LINC00557-201ENST00000563184 ZNF521Q96K83 1311 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 FAM237BA0A1B0GVD1 139 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 LIPT2A6NK58 231 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 TTC36A6NLP5 189 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 BCAT2O15382 392 aaPredicted RBP5.79□□□□□ -1.48
LINC00557-201ENST00000563184 ZBED4O75132 1171 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 RGS11O94810 467 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 CBSLP0DN79 551 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 ACADMP11310 421 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 ETFAP13804 333 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 MYF6P23409 242 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 TM4SF1P30408 202 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 CBSP35520 551 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 MYBPC2Q14324 1141 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 FRG1Q14331 258 aaKnown RBP5.79□□□□□ -1.48
LINC00557-201ENST00000563184 HNF4GQ14541 408 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 ARHGEF6Q15052 776 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 ZKSCAN2Q63HK3 967 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 TTI2Q6NXR4 508 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 LCTLQ6UWM7 567 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 QSOX2Q6ZRP7 698 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 Q6ZTK2 550 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 USP6NLQ92738 828 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 FBXL8Q96CD0 374 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 MAGEE1Q9HCI5 957 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 CYSLTR2Q9NS75 346 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 RNF7Q9UBF6 113 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 HAO1Q9UJM8 370 aa5.79□□□□□ -1.48
LINC00557-201ENST00000563184 KAT6BQ8WYB5 2073 aa5.78□□□□□ -1.48
LINC00557-201ENST00000563184 MS4A18H0YCH9 400 aa5.78□□□□□ -1.48
LINC00557-201ENST00000563184 SOX30O94993 753 aa5.78□□□□□ -1.48
LINC00557-201ENST00000563184 CYP1A2P05177 515 aa5.78□□□□□ -1.48
LINC00557-201ENST00000563184 NFKBIAP25963 317 aa5.78□□□□□ -1.48
LINC00557-201ENST00000563184 MLH1P40692 756 aa5.78□□□□□ -1.48
LINC00557-201ENST00000563184 ADORA2A-AS1P86434 159 aa5.78□□□□□ -1.48
LINC00557-201ENST00000563184 TCTN1Q2MV58 587 aa5.78□□□□□ -1.48
LINC00557-201ENST00000563184 DPCR1Q3MIW9 517 aa5.78□□□□□ -1.48
LINC00557-201ENST00000563184 WDR78Q5VTH9 848 aa5.78□□□□□ -1.48
LINC00557-201ENST00000563184 FAM205BPQ63HN1 556 aa5.78□□□□□ -1.48
LINC00557-201ENST00000563184 NCEH1Q6PIU2 408 aa5.78□□□□□ -1.48
LINC00557-201ENST00000563184 TSSK4Q6SA08 328 aa5.78□□□□□ -1.48
LINC00557-201ENST00000563184 PIM3Q86V86 326 aa5.78□□□□□ -1.48
LINC00557-201ENST00000563184 ZCCHC9Q8N567 271 aaKnown RBP5.78□□□□□ -1.48
LINC00557-201ENST00000563184 FRMD1Q8N878 549 aa5.78□□□□□ -1.48
LINC00557-201ENST00000563184 ARRDC2Q8TBH0 407 aa5.78□□□□□ -1.48
LINC00557-201ENST00000563184 NEK9Q8TD19 979 aa5.78□□□□□ -1.48
LINC00557-201ENST00000563184 FAM149B1Q96BN6 582 aa5.78□□□□□ -1.48
LINC00557-201ENST00000563184 MMABQ96EY8 250 aaPredicted RBP5.78□□□□□ -1.48
LINC00557-201ENST00000563184 CATSPERBQ9H7T0 1116 aa5.78□□□□□ -1.48
LINC00557-201ENST00000563184 KIF9Q9HAQ2 790 aa5.78□□□□□ -1.48
LINC00557-201ENST00000563184 FBRSL1Q9HCM7 1045 aaKnown RBP5.78□□□□□ -1.48
LINC00557-201ENST00000563184 NFE2L3Q9Y4A8 694 aa5.78□□□□□ -1.48
LINC00557-201ENST00000563184 RPS10-NUDT3A0A1W2PQS6 291 aa5.77□□□□□ -1.49
LINC00557-201ENST00000563184 A0A1W2PRG0 241 aa5.77□□□□□ -1.49
LINC00557-201ENST00000563184 FSD2A1L4K1 749 aa5.77□□□□□ -1.49
LINC00557-201ENST00000563184 J3KR12 359 aa5.77□□□□□ -1.49
LINC00557-201ENST00000563184 TNFRSF13BO14836 293 aaPredicted RBP5.77□□□□□ -1.49
LINC00557-201ENST00000563184 RGS14O43566 566 aa5.77□□□□□ -1.49
LINC00557-201ENST00000563184 EIF2S1P05198 315 aaKnown RBP5.77□□□□□ -1.49
LINC00557-201ENST00000563184 MMP2P08253 660 aa5.77□□□□□ -1.49
LINC00557-201ENST00000563184 ARL3P36405 182 aa5.77□□□□□ -1.49
LINC00557-201ENST00000563184 COMPP49747 757 aaPredicted RBP5.77□□□□□ -1.49
LINC00557-201ENST00000563184 PLCD1P51178 756 aa5.77□□□□□ -1.49
LINC00557-201ENST00000563184 DRG2P55039 364 aaKnown RBP5.77□□□□□ -1.49
LINC00557-201ENST00000563184 CSTF3Q12996 717 aaKnown RBP5.77□□□□□ -1.49
LINC00557-201ENST00000563184 GPS2Q13227 327 aa5.77□□□□□ -1.49
LINC00557-201ENST00000563184 MAMLD1Q13495 774 aa5.77□□□□□ -1.49
LINC00557-201ENST00000563184 CTTNQ14247 550 aaKnown RBP5.77□□□□□ -1.49
LINC00557-201ENST00000563184 CXorf66Q5JRM2 361 aaPredicted RBP5.77□□□□□ -1.49
LINC00557-201ENST00000563184 IKBIPQ70UQ0 350 aa5.77□□□□□ -1.49
LINC00557-201ENST00000563184 MON1BQ7L1V2 547 aa5.77□□□□□ -1.49
LINC00557-201ENST00000563184 NEXN-AS1Q8NBZ9 246 aa5.77□□□□□ -1.49
LINC00557-201ENST00000563184 HUS1BQ8NHY5 278 aa5.77□□□□□ -1.49
LINC00557-201ENST00000563184 SMARCE1Q969G3 411 aa5.77□□□□□ -1.49
LINC00557-201ENST00000563184 ERGIC1Q969X5 290 aa5.77□□□□□ -1.49
LINC00557-201ENST00000563184 HMCESQ96FZ2 354 aa5.77□□□□□ -1.49
LINC00557-201ENST00000563184 BPIFA1Q9NP55 256 aa5.77□□□□□ -1.49
LINC00557-201ENST00000563184 SEPT11Q9NVA2 429 aaKnown RBP5.77□□□□□ -1.49
LINC00557-201ENST00000563184 TMEM51Q9NW97 253 aa5.77□□□□□ -1.49
LINC00557-201ENST00000563184 CORO1CQ9ULV4 474 aaPredicted RBP5.77□□□□□ -1.49
LINC00557-201ENST00000563184 SRPRBQ9Y5M8 271 aaKnown RBP5.77□□□□□ -1.49
LINC00557-201ENST00000563184 INSL5Q9Y5Q6 135 aa5.77□□□□□ -1.49
LINC00557-201ENST00000563184 UTYO14607 1347 aa5.76□□□□□ -1.49
LINC00557-201ENST00000563184 KDM4EB2RXH2 506 aaPredicted RBP5.76□□□□□ -1.49
LINC00557-201ENST00000563184 B4DGG1 531 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms