RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ARHGAP22Q7Z5H3 698 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 MRPL10Q7Z7H8 261 aaKnown RBP13.17□□□□□ -0.3
USB1-207ENST00000563149 SPATA6LQ8N4H0 392 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 C3orf58Q8NDZ4 430 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 HMGCLL1Q8TB92 370 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 LPGAT1Q92604 370 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 ATP6V1E2Q96A05 226 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 PBXIP1Q96AQ6 731 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 EME1Q96AY2 570 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 ROPN1LQ96C74 230 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 L3HYPDHQ96EM0 354 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 SGF29Q96ES7 293 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 C1orf74Q96LT6 269 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 PKMYT1Q99640 499 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 HAUS8Q9BT25 410 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 RBM38Q9H0Z9 239 aaKnown RBP13.17□□□□□ -0.3
USB1-207ENST00000563149 TMEM181Q9P2C4 612 aa13.17□□□□□ -0.3
USB1-207ENST00000563149 ARHGEF37A1IGU5 675 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 BBIP1A8MTZ0 92 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 FBP2O00757 339 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 NRP2O60462 931 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 OR6B1O95007 311 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 MYCNP04198 464 aaPredicted RBP13.16□□□□□ -0.3
USB1-207ENST00000563149 CCDC166P0CW27 439 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 ETS2P15036 469 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 HOXB8P17481 243 aaPredicted RBP13.16□□□□□ -0.3
USB1-207ENST00000563149 SERPINH1P50454 418 aaKnown RBP13.16□□□□□ -0.3
USB1-207ENST00000563149 CDKL1Q00532 357 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 NFKB2Q00653 900 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 PRAMEF19Q5SWL8 479 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 RBM20Q5T481 1227 aaKnown RBP13.16□□□□□ -0.3
USB1-207ENST00000563149 C6orf52Q5T4I8 152 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 ARTNQ5T4W7 220 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 HECTD2Q5U5R9 776 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 OLFML2BQ68BL8 750 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 CHERPQ8IWX8 916 aaKnown RBP13.16□□□□□ -0.3
USB1-207ENST00000563149 GALNT4Q8N4A0 578 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 PCDH20Q8N6Y1 951 aaKnown RBP13.16□□□□□ -0.3
USB1-207ENST00000563149 NMD3Q96D46 503 aaKnown RBP13.16□□□□□ -0.3
USB1-207ENST00000563149 ZNF419Q96HQ0 510 aaPredicted RBP13.16□□□□□ -0.3
USB1-207ENST00000563149 HIC2Q96JB3 615 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 MPP4Q96JB8 637 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 FCRL2Q96LA5 508 aaPredicted RBP13.16□□□□□ -0.3
USB1-207ENST00000563149 OLFM1Q99784 485 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 SUDS3Q9H7L9 328 aaPredicted RBP13.16□□□□□ -0.3
USB1-207ENST00000563149 ATXN10Q9UBB4 475 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 TMCO1Q9UM00 188 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 ST3GAL5Q9UNP4 418 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 VWA7Q9Y334 891 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 TRAF6Q9Y4K3 522 aa13.16□□□□□ -0.3
USB1-207ENST00000563149 MYLKQ15746 1914 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 NEMP2A6NFY4 417 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 ARL5CA6NH57 179 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 MEIS3P2A8K0S8 358 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 E9PAM4 449 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 MRASO14807 208 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 WISP3O95389 354 aaPredicted RBP13.15□□□□□ -0.3
USB1-207ENST00000563149 TCN1P20061 433 aaPredicted RBP13.15□□□□□ -0.3
USB1-207ENST00000563149 RENBPP51606 427 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 NDST2P52849 883 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 STX1BP61266 288 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 MAP2K5Q13163 448 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 BIRC2Q13490 618 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 IKBKEQ14164 716 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 MORN1Q5T089 497 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 PRMT9Q6P2P2 845 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 IYDQ6PHW0 289 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 KLHDC10Q6PID8 442 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 PAOXQ6QHF9 649 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 LARP4Q71RC2 724 aaKnown RBP eCLIP13.15□□□□□ -0.3
USB1-207ENST00000563149 THEM5Q8N1Q8 247 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.15□□□□□ -0.3
USB1-207ENST00000563149 METTL25Q8N6Q8 603 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 GOLM1Q8NBJ4 401 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 PCYOX1LQ8NBM8 494 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 TRPC4APQ8TEL6 797 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 ZUFSPQ96AP4 578 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 IMP4Q96G21 291 aaKnown RBP13.15□□□□□ -0.3
USB1-207ENST00000563149 PRPF18Q99633 342 aaKnown RBP13.15□□□□□ -0.3
USB1-207ENST00000563149 MFSD1Q9H3U5 465 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 GSTO2Q9H4Y5 243 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 CACNG4Q9UBN1 327 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 MTF2Q9Y483 593 aaPredicted RBP13.15□□□□□ -0.3
USB1-207ENST00000563149 PATJQ8NI35 1801 aa13.15□□□□□ -0.3
USB1-207ENST00000563149 TRIP12Q14669 1992 aaPredicted RBP13.15□□□□□ -0.3
USB1-207ENST00000563149 M0QZQ0 153 aa13.15□□□□□ -0.31
USB1-207ENST00000563149 TMCC1O94876 653 aa13.15□□□□□ -0.31
USB1-207ENST00000563149 ASLP04424 464 aa13.15□□□□□ -0.31
USB1-207ENST00000563149 YY1P25490 414 aa13.15□□□□□ -0.31
USB1-207ENST00000563149 SCNN1GP51170 649 aa13.15□□□□□ -0.31
USB1-207ENST00000563149 MLLT6P55198 1093 aaPredicted RBP13.15□□□□□ -0.31
USB1-207ENST00000563149 C1QTNF8P60827 252 aa13.15□□□□□ -0.31
USB1-207ENST00000563149 USP46P62068 366 aa13.15□□□□□ -0.31
USB1-207ENST00000563149 TNK2Q07912 1038 aa13.15□□□□□ -0.31
USB1-207ENST00000563149 LAMB3Q13751 1172 aa13.15□□□□□ -0.31
USB1-207ENST00000563149 SPATS1Q496A3 300 aa13.15□□□□□ -0.31
USB1-207ENST00000563149 ZNF678Q5SXM1 525 aa13.15□□□□□ -0.31
USB1-207ENST00000563149 AGMOQ6ZNB7 445 aa13.15□□□□□ -0.31
USB1-207ENST00000563149 CILP2Q8IUL8 1156 aa13.15□□□□□ -0.31
USB1-207ENST00000563149 CLYBLQ8N0X4 340 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms