RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 PTPN20Q4JDL3 420 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 C14orf28Q4W4Y0 310 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 TTI2Q6NXR4 508 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 GDPD4Q6W3E5 623 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 NLRP14Q86W24 1093 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 ZDHHC17Q8IUH5 632 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 HID1Q8IV36 788 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 SFTPA2Q8IWL1 248 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 C1orf131Q8NDD1 294 aaKnown RBP8.4□□□□□ -1.06
CKLF-208ENST00000563092 HCAR2Q8TDS4 363 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 SHC3Q92529 594 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 PMEPA1Q969W9 287 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 DHTKD1Q96HY7 919 aaPredicted RBP8.4□□□□□ -1.06
CKLF-208ENST00000563092 SPATA32Q96LK8 384 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 KLHL32Q96NJ5 620 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 CATSPER2Q96P56 530 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 SPON2Q9BUD6 331 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 APOOQ9BUR5 198 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 GTPBP4Q9BZE4 634 aaKnown RBP8.4□□□□□ -1.06
CKLF-208ENST00000563092 TM6SF2Q9BZW4 377 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 ZYG11BQ9C0D3 744 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 INTS2Q9H0H0 1204 aaKnown RBP8.4□□□□□ -1.06
CKLF-208ENST00000563092 UBE2TQ9NPD8 197 aaPredicted RBP8.4□□□□□ -1.06
CKLF-208ENST00000563092 DACH1Q9UI36 760 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 DOLKQ9UPQ8 538 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 NEU3Q9UQ49 428 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 ZDHHC9Q9Y397 364 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 DOCK4Q8N1I0 1966 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 CHD5Q8TDI0 1954 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 TEP1Q99973 2627 aaKnown RBP8.4□□□□□ -1.07
CKLF-208ENST00000563092 SDK2Q58EX2 2172 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 TSPAN11A1L157 253 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 BLACEA4D250 179 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 TNFRSF10CO14798 259 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 CAPN5O15484 640 aaPredicted RBP8.39□□□□□ -1.07
CKLF-208ENST00000563092 CPNE6O95741 557 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 UGT2B4P06133 528 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 HOXC4P09017 264 aaPredicted RBP8.39□□□□□ -1.07
CKLF-208ENST00000563092 CTSEP14091 401 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 LIFP15018 202 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 ITIH2P19823 946 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 CDH5P33151 784 aaPredicted RBP8.39□□□□□ -1.07
CKLF-208ENST00000563092 UGT1A3P35503 534 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 ACVRL1P37023 503 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 ETFBP38117 255 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 CCR10P46092 362 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 GABRB2P47870 512 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 DNA2P51530 1060 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 MAPK10P53779 464 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 GEMIN4P57678 1058 aaKnown RBP8.39□□□□□ -1.07
CKLF-208ENST00000563092 SNRPD1P62314 119 aaKnown RBP8.39□□□□□ -1.07
CKLF-208ENST00000563092 INPP5AQ14642 412 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 LRRC14Q15048 493 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 CRTC2Q53ET0 693 aaPredicted RBP8.39□□□□□ -1.07
CKLF-208ENST00000563092 TMEM164Q5U3C3 297 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 TRNP1Q6NT89 227 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 ENPP7Q6UWV6 458 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 ARCQ7LC44 396 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 TTC7BQ86TV6 843 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 FMR1NBQ8N0W7 255 aaPredicted RBP8.39□□□□□ -1.07
CKLF-208ENST00000563092 Q8N9G6 341 aaPredicted RBP8.39□□□□□ -1.07
CKLF-208ENST00000563092 OR6K2Q8NGY2 324 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 PDXPQ96GD0 296 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 SLC45A3Q96JT2 553 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 TAAR9Q96RI9 348 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 TBCBQ99426 244 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 DDA1Q9BW61 102 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 NDFIP2Q9NV92 336 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.39□□□□□ -1.07
CKLF-208ENST00000563092 LRIT1Q9P2V4 623 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 STAP1Q9ULZ2 295 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 PLAAQ9Y263 795 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 PAXBP1Q9Y5B6 917 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 LRBAP50851 2863 aa8.39□□□□□ -1.07
CKLF-208ENST00000563092 SPTBN1Q01082 2364 aaKnown RBP8.39□□□□□ -1.07
CKLF-208ENST00000563092 LRRK1Q38SD2 2015 aa8.38□□□□□ -1.07
CKLF-208ENST00000563092 IGHV5-10-1A0A0J9YXX1 117 aa8.38□□□□□ -1.07
CKLF-208ENST00000563092 CFAP69A5D8W1 941 aa8.38□□□□□ -1.07
CKLF-208ENST00000563092 KRIT1O00522 736 aa8.38□□□□□ -1.07
CKLF-208ENST00000563092 ST8SIA5O15466 376 aa8.38□□□□□ -1.07
CKLF-208ENST00000563092 HTR1BP28222 390 aa8.38□□□□□ -1.07
CKLF-208ENST00000563092 CD1CP29017 333 aa8.38□□□□□ -1.07
CKLF-208ENST00000563092 TRIM23P36406 574 aa8.38□□□□□ -1.07
CKLF-208ENST00000563092 MAPKAPK2P49137 400 aa8.38□□□□□ -1.07
CKLF-208ENST00000563092 ATP1A2P50993 1020 aa8.38□□□□□ -1.07
CKLF-208ENST00000563092 KIAA1024LP59773 190 aa8.38□□□□□ -1.07
CKLF-208ENST00000563092 KRT85P78386 507 aa8.38□□□□□ -1.07
CKLF-208ENST00000563092 DEUP1Q05D60 604 aa8.38□□□□□ -1.07
CKLF-208ENST00000563092 MTM1Q13496 603 aa8.38□□□□□ -1.07
CKLF-208ENST00000563092 TRA2AQ13595 282 aaKnown RBP eCLIP8.38□□□□□ -1.07
CKLF-208ENST00000563092 NCAPHQ15003 741 aa8.38□□□□□ -1.07
CKLF-208ENST00000563092 POLD3Q15054 466 aaPredicted RBP8.38□□□□□ -1.07
CKLF-208ENST00000563092 LRRC73Q5JTD7 316 aa8.38□□□□□ -1.07
CKLF-208ENST00000563092 TRIM65Q6PJ69 517 aa8.38□□□□□ -1.07
CKLF-208ENST00000563092 PIM3Q86V86 326 aa8.38□□□□□ -1.07
CKLF-208ENST00000563092 IRF2BP1Q8IU81 584 aa8.38□□□□□ -1.07
CKLF-208ENST00000563092 PASD1Q8IV76 773 aa8.38□□□□□ -1.07
CKLF-208ENST00000563092 ATL2Q8NHH9 583 aa8.38□□□□□ -1.07
CKLF-208ENST00000563092 C9orf43Q8TAL5 461 aaPredicted RBP8.38□□□□□ -1.07
CKLF-208ENST00000563092 CXorf40AQ8TE69 158 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms