RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 EPHB2P29323 1055 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 RFC1P35251 1148 aaPredicted RBP11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 SRP54P61011 504 aaKnown RBP11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 FMO1Q01740 532 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 PTP4A2Q12974 167 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 SERINC3Q13530 473 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 INPP5AQ14642 412 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 CYTH1Q15438 398 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 DPCR1Q3MIW9 517 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 PARP15Q460N3 678 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 HSP90AA4PQ58FG1 418 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 CAVIN1Q6NZI2 390 aaKnown RBP11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 OGFOD3Q6PK18 319 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 RD3Q7Z3Z2 195 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 PHLDB2Q86SQ0 1253 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 DNAAF5Q86Y56 855 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 UMODL1-AS1Q8N2C9 162 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 GPR156Q8NFN8 814 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 SLC30A5Q8TAD4 765 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 TMEM159Q96B96 161 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 HMCESQ96FZ2 354 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 WDR92Q96MX6 357 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 ZNF641Q96N77 438 aaPredicted RBP11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 RBM15Q96T37 977 aaKnown RBP eCLIP11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 KLC2Q9H0B6 622 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 SUV39H2Q9H5I1 410 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 SIRPGQ9P1W8 387 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 LHX3Q9UBR4 397 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 KLQ9UEF7 1012 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 DACH1Q9UI36 760 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 APPL1Q9UKG1 709 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 COQ6Q9Y2Z9 468 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 DAAM1Q9Y4D1 1078 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 DGKBQ9Y6T7 804 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 ATMQ13315 3056 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 GFPT2O94808 682 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 TNFP01375 233 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 JMJD7P0C870 316 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 LIPCP11150 499 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 PNLIPP16233 465 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 GLB1P16278 677 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 GPD1P21695 349 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 SOX5P35711 763 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 AIF1P55008 147 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 ZFP36L1Q07352 338 aaKnown RBP11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 MTM1Q13496 603 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 LINC00303Q3SY05 128 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 TCP11X2Q5H9J9 407 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 CT47A1Q5JQC4 288 aaPredicted RBP11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 EFHC2Q5JST6 749 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 ERAP2Q6P179 960 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 BRAT1Q6PJG6 821 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 WDR59Q6PJI9 974 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 USP53Q70EK8 1073 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 JAMLQ86YT9 394 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 PYROXD2Q8N2H3 581 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 EXD3Q8N9H8 876 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 NETO2Q8NC67 525 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 C3orf20Q8ND61 904 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 SGF29Q96ES7 293 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 TUBGCP5Q96RT8 1024 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 NCAPGQ9BPX3 1015 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 FOXP3Q9BZS1 431 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 GANQ9H2C0 597 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 CATSPERBQ9H7T0 1116 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 PCDH12Q9NPG4 1184 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 SAMSN1Q9NSI8 373 aaKnown RBP11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 UBA2Q9UBT2 640 aaPredicted RBP11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 OR1A2Q9Y585 309 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 LRP4O75096 1905 aa11.92□□□□□ -0.5
CARMIL3-204ENST00000561354 SIGLEC16A6NMB1 481 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 PIGNO95427 931 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 HGFP14210 728 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 MMP12P39900 470 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 NSFP46459 744 aaKnown RBP11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 CSNK1DP48730 415 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 LIG3P49916 1009 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 ZNF143P52747 638 aaPredicted RBP11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 JAM2P57087 298 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 TGIF1Q15583 401 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 CERCAMQ5T4B2 595 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 NYAP1Q6ZVC0 841 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 PHF13Q86YI8 300 aaPredicted RBP11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 CCNJLQ8IV13 435 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 PDXPQ96GD0 296 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 EXOC2Q96KP1 924 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 PCDHB18PQ96TA0 734 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 SELENOOQ9BVL4 669 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 GRPEL1Q9HAV7 217 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 PDFQ9HBH1 243 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 DONSONQ9NYP3 566 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 ADAM22Q9P0K1 906 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 SEPT10Q9P0V9 454 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 PISDQ9UG56 409 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 ATP8A1Q9Y2Q0 1164 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 LOXL2Q9Y4K0 774 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 LRRK1Q38SD2 2015 aa11.91□□□□□ -0.5
CARMIL3-204ENST00000561354 TCRBV5S1A1TA0A578 114 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 PYCARD-AS1I3L0S3 204 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 CACNB4O00305 520 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms