RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 BRAT1Q6PJG6 821 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 Q6ZSR6 202 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 ZSWIM9Q86XI8 627 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 LRRC49Q8IUZ0 686 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 KATNAL2Q8IYT4 538 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 OR13H1Q8NG92 308 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 RHBDD1Q8TEB9 315 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 TMEM131Q92545 1883 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 P3H4Q92791 437 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 FAF2Q96CS3 445 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 NUDCD1Q96RS6 583 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 FAM118BQ9BPY3 351 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 LZTFL1Q9NQ48 299 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 ATP8A1Q9Y2Q0 1164 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 RAI2Q9Y5P3 530 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 DMXL1Q9Y485 3027 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 A0A0U1RQS6 177 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 SPAARA0A1B0GVQ0 90 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 POM121BA6NF01 834 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 PJA2O43164 708 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 AP1G1O43747 822 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 MAGEC1O60732 1142 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 KCNK5O95279 499 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 PEX11BO96011 259 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 SLC4A1P02730 911 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 PCCBP05166 539 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 ELFN1P0C7U0 828 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 C7P10643 843 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 PECAM1P16284 738 aaPredicted RBP10.19□□□□□ -0.78
HERC1-212ENST00000561348 NUDT1P36639 197 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 CD86P42081 329 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 CSNK1DP48730 415 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 ARRB1P49407 418 aaPredicted RBP10.19□□□□□ -0.78
HERC1-212ENST00000561348 CCT8P50990 548 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 THOP1P52888 689 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 RWDD2BP57060 319 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 ADCY2Q08462 1091 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 TRAF2Q12933 501 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 FGL2Q14314 439 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 SUZ12Q15022 739 aaKnown RBP10.19□□□□□ -0.78
HERC1-212ENST00000561348 PTPRRQ15256 657 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 SLC9A4Q6AI14 798 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 AADACL2Q6P093 401 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 BZW1Q7L1Q6 419 aaKnown RBP10.19□□□□□ -0.78
HERC1-212ENST00000561348 LRRC8AQ8IWT6 810 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 SYCE1Q8N0S2 351 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 UBL4BQ8N7F7 174 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 MFSD2AQ8NA29 543 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 CCDC112Q8NEF3 446 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 EXD1Q8NHP7 514 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 TFB1MQ8WVM0 346 aaKnown RBP10.19□□□□□ -0.78
HERC1-212ENST00000561348 FAM131CQ96AQ9 280 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 HDAC11Q96DB2 347 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 NSMCE3Q96MG7 304 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 MGME1Q9BQP7 344 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 C1QTNF7Q9BXJ2 289 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 SUDS3Q9H7L9 328 aaPredicted RBP10.19□□□□□ -0.78
HERC1-212ENST00000561348 C10orf88Q9H8K7 445 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 DNAJC28Q9NX36 388 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 DKK3Q9UBP4 350 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 TPX2Q9ULW0 747 aaKnown RBP10.19□□□□□ -0.78
HERC1-212ENST00000561348 CHKBQ9Y259 395 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 PCDHA3Q9Y5H8 950 aa10.19□□□□□ -0.78
HERC1-212ENST00000561348 ASCC3Q8N3C0 2202 aaKnown RBP10.19□□□□□ -0.78
HERC1-212ENST00000561348 TDRD6O60522 2096 aaKnown RBP10.18□□□□□ -0.78
HERC1-212ENST00000561348 TP53BP1Q12888 1972 aaPredicted RBP10.18□□□□□ -0.78
HERC1-212ENST00000561348 PCDH15Q96QU1 1955 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 hCG_1818297A0A087WSY0 165 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 A0A1W2PR77 199 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 CCDC66A2RUB6 948 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 A6NNZ2 444 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 AREL1O15033 823 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 SCAMP1O15126 338 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 ARHGAP6O43182 974 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 SPINT1O43278 529 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 KRT86O43790 486 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 ALPIP09923 528 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 CCDC175P0C221 793 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 C6P13671 934 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 CD59P13987 128 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 TGM2P21980 687 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 NFKBIAP25963 317 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 CTNNA1P35221 906 aaKnown RBP10.18□□□□□ -0.78
HERC1-212ENST00000561348 CTSKP43235 329 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 NXPH1P58417 271 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 SIM1P81133 766 aaPredicted RBP10.18□□□□□ -0.78
HERC1-212ENST00000561348 PPIDQ08752 370 aaKnown RBP10.18□□□□□ -0.78
HERC1-212ENST00000561348 BNIP3Q12983 259 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 ZBTB17Q13105 803 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 PDE1CQ14123 709 aaPredicted RBP10.18□□□□□ -0.78
HERC1-212ENST00000561348 ARHGEF7Q14155 803 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 LRRC14Q15048 493 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 TMEM259Q4ZIN3 620 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 GCNT7Q6ZNI0 430 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 RD3Q7Z3Z2 195 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 SPATS2Q86XZ4 545 aaKnown RBP10.18□□□□□ -0.78
HERC1-212ENST00000561348 NAXDQ8IW45 347 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 NDUFAF2Q8N183 169 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 LPCAT1Q8NF37 534 aa10.18□□□□□ -0.78
HERC1-212ENST00000561348 TSGA13Q96PP4 275 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms