RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 SPINK2P20155 84 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 CCNCP24863 283 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 NFKBIAP25963 317 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 PMLP29590 882 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 RABIFP47224 123 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 AP1B1Q10567 949 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 LRRC14Q15048 493 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 TCEAL1Q15170 157 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 TMEM52BQ4KMG9 183 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 DENND2CQ68D51 928 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 DBX2Q6ZNG2 339 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 KIAA1328Q86T90 577 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 CCDC50Q8IVM0 306 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 PQLC3Q8N755 202 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 DENND6BQ8NEG7 585 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 SAP25Q8TEE9 199 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 ASB12Q8WXK4 309 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 SEMA3CQ99985 751 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 RBM22Q9NW64 420 aaKnown RBP eCLIP13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 DTLQ9NZJ0 730 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 IMPACTQ9P2X3 320 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 PCNX2A6NKB5 2137 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 A0A0A6YYK5 440 aaPredicted RBP13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 A0A1W2PQ67 120 aa13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 TRAFD1O14545 582 aaPredicted RBP13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 TNFSF14O43557 240 aa13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 HYAL3O43820 417 aaPredicted RBP13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 SOCS5O75159 536 aa13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 TRIM16O95361 564 aa13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 LDOC1O95751 146 aaPredicted RBP13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 MMP12P39900 470 aa13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 RXRGP48443 463 aa13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 EPHB1P54762 984 aa13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 HADHBP55084 474 aaKnown RBP13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 SLC10A2Q12908 348 aaPredicted RBP13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 PTK2BQ14289 1009 aa13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 LLGL1Q15334 1064 aa13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 SHBQ15464 509 aa13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 ARMC12Q5T9G4 340 aa13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 RAD9BQ6WBX8 426 aa13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 KDM7AQ6ZMT4 941 aa13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 PARGQ86W56 976 aa13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 CCDC13Q8IYE1 715 aa13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 SLC22A18ASQ8N1D0 253 aa13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 CENPTQ96BT3 561 aa13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 ECHDC3Q96DC8 303 aa13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 CNDP2Q96KP4 475 aaKnown RBP13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 LGMNQ99538 433 aa13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 KLF6Q99612 283 aaPredicted RBP13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 SCNM1Q9BWG6 230 aa13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 SEPT10Q9P0V9 454 aa13.05□□□□□ -0.32
CTDSPL2-209ENST00000560620 NCOR2Q9Y618 2525 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 CABIN1Q9Y6J0 2220 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 SPTY2D1-AS1A0A0U1RR47 76 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 C3orf70A6NLC5 250 aaPredicted RBP13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 ZNF487B1APH4 448 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 H3BM21 787 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 KCNK1O00180 336 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 PPP1R12AO14974 1030 aaPredicted RBP13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 FFAR2O15552 330 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 PSTPIP1O43586 416 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 TOP3BO95985 862 aaKnown RBP13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 PCCBP05166 539 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 ATXN1LP0C7T5 689 aaKnown RBP13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 KRT10P13645 584 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 CR2P20023 1033 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 CA4P22748 312 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 CDC25BP30305 580 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 IGFALSP35858 605 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 HNRNPKP61978 463 aaKnown RBP eCLIP13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 DSC2Q02487 901 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 TRAF2Q12933 501 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 TFDP2Q14188 446 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 ACOX1Q15067 660 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 PDK1Q15118 436 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 IRF4Q15306 451 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 RALGPS1Q5JS13 557 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 SLC9A4Q6AI14 798 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 C11orf63Q6NUN7 778 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 MFSD7Q6UXD7 560 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 NPNTQ6UXI9 565 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 USP45Q70EL2 814 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 VSIG1Q86XK7 387 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 NDUFAF2Q8N183 169 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 CHCHD4Q8N4Q1 142 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 TEX26Q8N6G2 289 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 PLD5Q8N7P1 536 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 ACRBPQ8NEB7 543 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 HDAC11Q96DB2 347 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 TSGA13Q96PP4 275 aa13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 MBNL1Q9NR56 388 aaKnown RBP13.04□□□□□ -0.32
CTDSPL2-209ENST00000560620 TDRD6O60522 2096 aaKnown RBP13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 GOLGA6CA6NDK9 693 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 GOLGA6BA6NDN3 693 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 ENC1O14682 589 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 HTRA2O43464 458 aaPredicted RBP13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 CST8O60676 142 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 RECQL5O94762 991 aaPredicted RBP13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 ZRANB2O95218 330 aaKnown RBP eCLIP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms