RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 ITIH2P19823 946 aa17.97■□□□□ 0.47
TSPAN3-208ENST00000560514 MAPKAPK2P49137 400 aa17.97■□□□□ 0.47
TSPAN3-208ENST00000560514 BIRC2Q13490 618 aa17.97■□□□□ 0.47
TSPAN3-208ENST00000560514 AMZ1Q400G9 498 aa17.97■□□□□ 0.47
TSPAN3-208ENST00000560514 TMEM52BQ4KMG9 183 aa17.97■□□□□ 0.47
TSPAN3-208ENST00000560514 OGFOD3Q6PK18 319 aa17.97■□□□□ 0.47
TSPAN3-208ENST00000560514 FAM131BQ86XD5 332 aa17.97■□□□□ 0.47
TSPAN3-208ENST00000560514 IRF2BP1Q8IU81 584 aa17.97■□□□□ 0.47
TSPAN3-208ENST00000560514 CREBRFQ8IUR6 639 aa17.97■□□□□ 0.47
TSPAN3-208ENST00000560514 C9orf43Q8TAL5 461 aaPredicted RBP17.97■□□□□ 0.47
TSPAN3-208ENST00000560514 KIAA1524Q8TCG1 905 aa17.97■□□□□ 0.47
TSPAN3-208ENST00000560514 C18orf8Q96DM3 657 aa17.97■□□□□ 0.47
TSPAN3-208ENST00000560514 PDXPQ96GD0 296 aa17.97■□□□□ 0.47
TSPAN3-208ENST00000560514 TTYH3Q9C0H2 523 aa17.97■□□□□ 0.47
TSPAN3-208ENST00000560514 MAGEH1Q9H213 219 aa17.97■□□□□ 0.47
TSPAN3-208ENST00000560514 RDH14Q9HBH5 336 aa17.97■□□□□ 0.47
TSPAN3-208ENST00000560514 ZNF71Q9NQZ8 489 aaPredicted RBP17.97■□□□□ 0.47
TSPAN3-208ENST00000560514 DKK3Q9UBP4 350 aa17.97■□□□□ 0.47
TSPAN3-208ENST00000560514 APEX2Q9UBZ4 518 aa17.97■□□□□ 0.47
TSPAN3-208ENST00000560514 CTNND2Q9UQB3 1225 aa17.97■□□□□ 0.47
TSPAN3-208ENST00000560514 DGKBQ9Y6T7 804 aa17.97■□□□□ 0.47
TSPAN3-208ENST00000560514 BLACEA4D250 179 aa17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 ZSCAN5CA6NGD5 496 aaPredicted RBP17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 ZNF891A8MT65 544 aaPredicted RBP17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 CACNB4O00305 520 aaPredicted RBP17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 HGSO14964 777 aaPredicted RBP17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 BUB1O43683 1085 aa17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 RAMP2O60895 175 aa17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 FGFR1OPO95684 399 aaKnown RBP17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 CCL4P13236 92 aa17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 LIFP15018 202 aa17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 CD44P16070 742 aaKnown RBP17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 KELP23276 732 aa17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 SCNN1AP37088 669 aa17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 MARSP56192 900 aaKnown RBP17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 MTM1Q13496 603 aa17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 HLTFQ14527 1009 aaKnown RBP eCLIP17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 EFHC2Q5JST6 749 aa17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 CFAP58Q5T655 872 aa17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 ERAP2Q6P179 960 aa17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 TMPRSS9Q7Z410 1059 aa17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 CACNA2D3Q8IZS8 1091 aa17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 TMEM35BQ8NCS4 154 aa17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 OR56A4Q8NGH8 313 aa17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 SHC3Q92529 594 aa17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 HMCESQ96FZ2 354 aa17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 CDH19Q9H159 772 aa17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 RETREG1Q9H6L5 497 aa17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 PLCB1Q9NQ66 1216 aa17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 MOSPD1Q9UJG1 213 aa17.96■□□□□ 0.47
TSPAN3-208ENST00000560514 CLEC18AA5D8T8 446 aa17.95■□□□□ 0.46
TSPAN3-208ENST00000560514 RHPN2P1A8MT19 583 aa17.95■□□□□ 0.46
TSPAN3-208ENST00000560514 CAPN5O15484 640 aaPredicted RBP17.95■□□□□ 0.46
TSPAN3-208ENST00000560514 TMCC1O94876 653 aa17.95■□□□□ 0.46
TSPAN3-208ENST00000560514 ALDH4A1P30038 563 aa17.95■□□□□ 0.46
TSPAN3-208ENST00000560514 STX17P56962 302 aa17.95■□□□□ 0.46
TSPAN3-208ENST00000560514 RHOAP61586 193 aa17.95■□□□□ 0.46
TSPAN3-208ENST00000560514 SPECC1LQ69YQ0 1117 aa17.95■□□□□ 0.46
TSPAN3-208ENST00000560514 CLEC18BQ6UXF7 455 aa17.95■□□□□ 0.46
TSPAN3-208ENST00000560514 GBP6Q6ZN66 633 aa17.95■□□□□ 0.46
TSPAN3-208ENST00000560514 ATCAYQ86WG3 371 aa17.95■□□□□ 0.46
TSPAN3-208ENST00000560514 CLEC18CQ8NCF0 446 aa17.95■□□□□ 0.46
TSPAN3-208ENST00000560514 MSANTD4Q8NCY6 345 aa17.95■□□□□ 0.46
TSPAN3-208ENST00000560514 RCBTB1Q8NDN9 531 aa17.95■□□□□ 0.46
TSPAN3-208ENST00000560514 CFAP57Q96MR6 1250 aa17.95■□□□□ 0.46
TSPAN3-208ENST00000560514 PSMG3-AS1Q96PY0 264 aa17.95■□□□□ 0.46
TSPAN3-208ENST00000560514 OR12D3Q9UGF7 316 aa17.95■□□□□ 0.46
TSPAN3-208ENST00000560514 ANKRD36A6QL64 1941 aa17.95■□□□□ 0.46
TSPAN3-208ENST00000560514 ARHGEF17Q96PE2 2063 aaPredicted RBP17.95■□□□□ 0.46
TSPAN3-208ENST00000560514 KDELR3O43731 214 aa17.94■□□□□ 0.46
TSPAN3-208ENST00000560514 RHOQP17081 205 aa17.94■□□□□ 0.46
TSPAN3-208ENST00000560514 SLC9A1P19634 815 aa17.94■□□□□ 0.46
TSPAN3-208ENST00000560514 UGT1A3P35503 534 aa17.94■□□□□ 0.46
TSPAN3-208ENST00000560514 B4GALNT1Q00973 533 aa17.94■□□□□ 0.46
TSPAN3-208ENST00000560514 CLPPQ16740 277 aaPredicted RBP17.94■□□□□ 0.46
TSPAN3-208ENST00000560514 SLC47A2Q86VL8 602 aa17.94■□□□□ 0.46
TSPAN3-208ENST00000560514 CASKIN2Q8WXE0 1202 aa17.94■□□□□ 0.46
TSPAN3-208ENST00000560514 OR1E3Q8WZA6 343 aa17.94■□□□□ 0.46
TSPAN3-208ENST00000560514 KIAA1143Q96AT1 154 aaPredicted RBP17.94■□□□□ 0.46
TSPAN3-208ENST00000560514 NDFIP2Q9NV92 336 aa17.94■□□□□ 0.46
TSPAN3-208ENST00000560514 TMEM248Q9NWD8 314 aa17.94■□□□□ 0.46
TSPAN3-208ENST00000560514 MAN1B1Q9UKM7 699 aa17.94■□□□□ 0.46
TSPAN3-208ENST00000560514 DAAM1Q9Y4D1 1078 aa17.94■□□□□ 0.46
TSPAN3-208ENST00000560514 PCDHGA3Q9Y5H0 932 aa17.94■□□□□ 0.46
TSPAN3-208ENST00000560514 GOLGA8SH3BPF8 625 aa17.93■□□□□ 0.46
TSPAN3-208ENST00000560514 FGF3P11487 239 aaPredicted RBP17.93■□□□□ 0.46
TSPAN3-208ENST00000560514 CSTF2P33240 577 aaKnown RBP eCLIP17.93■□□□□ 0.46
TSPAN3-208ENST00000560514 FLT3P36888 993 aa17.93■□□□□ 0.46
TSPAN3-208ENST00000560514 OR1D5P58170 312 aa17.93■□□□□ 0.46
TSPAN3-208ENST00000560514 BPIFB4P59827 614 aa17.93■□□□□ 0.46
TSPAN3-208ENST00000560514 EXOC3L4Q17RC7 722 aa17.93■□□□□ 0.46
TSPAN3-208ENST00000560514 TSR1Q2NL82 804 aaKnown RBP17.93■□□□□ 0.46
TSPAN3-208ENST00000560514 NYAP1Q6ZVC0 841 aa17.93■□□□□ 0.46
TSPAN3-208ENST00000560514 AGBL5Q8NDL9 886 aa17.93■□□□□ 0.46
TSPAN3-208ENST00000560514 HCAR2Q8TDS4 363 aa17.93■□□□□ 0.46
TSPAN3-208ENST00000560514 CCDC74BQ96LY2 380 aa17.93■□□□□ 0.46
TSPAN3-208ENST00000560514 ASPSCR1Q9BZE9 553 aa17.93■□□□□ 0.46
TSPAN3-208ENST00000560514 ZMYND15Q9H091 742 aa17.93■□□□□ 0.46
TSPAN3-208ENST00000560514 TMEM168Q9H0V1 697 aa17.93■□□□□ 0.46
TSPAN3-208ENST00000560514 CYP4F12Q9HCS2 524 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms