RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 ING5Q8WYH8 240 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 TIFAQ96CG3 184 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 SPATA5L1Q9BVQ7 753 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 REEP1Q9H902 201 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 MYOM1P52179 1685 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 GTPBP1O00178 669 aaKnown RBP13.53□□□□□ -0.24
TRAF3-208ENST00000560371 TGFB1I1O43294 461 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 SMNDC1O75940 238 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRAF3-208ENST00000560371 FAM153BP0C7A2 387 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 SMPD1P17405 629 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 CTBP1Q13363 440 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 CBX2Q14781 532 aaPredicted RBP13.53□□□□□ -0.24
TRAF3-208ENST00000560371 FAM153CQ494X1 144 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 VARS2Q5ST30 1063 aaKnown RBP13.53□□□□□ -0.24
TRAF3-208ENST00000560371 KLHL24Q6TFL4 600 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 BBS12Q6ZW61 710 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 RMND5BQ96G75 393 aaPredicted RBP13.53□□□□□ -0.24
TRAF3-208ENST00000560371 MRPS33Q9Y291 106 aaKnown RBP13.53□□□□□ -0.24
TRAF3-208ENST00000560371 ROBO3Q96MS0 1386 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 FCHO1O14526 889 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 UGT2B4P06133 528 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 ZNF844Q08AG5 666 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 CRHR2Q13324 411 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 MIIPQ5JXC2 388 aa13.53□□□□□ -0.24
TRAF3-208ENST00000560371 CCNE2O96020 404 aa13.52□□□□□ -0.24
TRAF3-208ENST00000560371 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.52□□□□□ -0.24
TRAF3-208ENST00000560371 TSNQ15631 228 aaKnown RBP13.52□□□□□ -0.24
TRAF3-208ENST00000560371 CYB5D1Q6P9G0 228 aa13.52□□□□□ -0.24
TRAF3-208ENST00000560371 LCLAT1Q6UWP7 414 aa13.52□□□□□ -0.24
TRAF3-208ENST00000560371 LINGO1Q96FE5 620 aa13.52□□□□□ -0.24
TRAF3-208ENST00000560371 OXNAD1Q96HP4 312 aaPredicted RBP13.52□□□□□ -0.24
TRAF3-208ENST00000560371 DHX33Q9H6R0 707 aaKnown RBP13.52□□□□□ -0.24
TRAF3-208ENST00000560371 AKAP12Q02952 1782 aa13.52□□□□□ -0.24
TRAF3-208ENST00000560371 C5orf60A6NFR6 353 aa13.52□□□□□ -0.24
TRAF3-208ENST00000560371 LILRA4P59901 499 aa13.52□□□□□ -0.24
TRAF3-208ENST00000560371 CPSF6Q16630 551 aaKnown RBP eCLIP13.52□□□□□ -0.24
TRAF3-208ENST00000560371 BNIPLQ7Z465 357 aa13.52□□□□□ -0.24
TRAF3-208ENST00000560371 ARMCX1Q9P291 453 aa13.52□□□□□ -0.24
TRAF3-208ENST00000560371 STBD1O95210 358 aa13.52□□□□□ -0.24
TRAF3-208ENST00000560371 OTCP00480 354 aa13.52□□□□□ -0.24
TRAF3-208ENST00000560371 FGRP09769 529 aa13.52□□□□□ -0.24
TRAF3-208ENST00000560371 SNHG28P0DPA3 235 aa13.52□□□□□ -0.24
TRAF3-208ENST00000560371 FLT3P36888 993 aa13.52□□□□□ -0.24
TRAF3-208ENST00000560371 RASAL3Q86YV0 1011 aa13.52□□□□□ -0.24
TRAF3-208ENST00000560371 MOSPD2Q8NHP6 518 aa13.52□□□□□ -0.24
TRAF3-208ENST00000560371 MYO19Q96H55 970 aa13.52□□□□□ -0.24
TRAF3-208ENST00000560371 S100A13Q99584 98 aa13.52□□□□□ -0.24
TRAF3-208ENST00000560371 AGO3Q9H9G7 860 aaKnown RBP13.52□□□□□ -0.24
TRAF3-208ENST00000560371 MCM8Q9UJA3 840 aa13.52□□□□□ -0.24
TRAF3-208ENST00000560371 ADAM30Q9UKF2 790 aa13.52□□□□□ -0.24
TRAF3-208ENST00000560371 FBXO5Q9UKT4 447 aa13.52□□□□□ -0.24
TRAF3-208ENST00000560371 TEX28O15482 410 aa13.52□□□□□ -0.25
TRAF3-208ENST00000560371 MMP8P22894 467 aa13.52□□□□□ -0.25
TRAF3-208ENST00000560371 ADRA1BP35368 520 aa13.52□□□□□ -0.25
TRAF3-208ENST00000560371 PIWIL2Q8TC59 973 aaKnown RBP13.52□□□□□ -0.25
TRAF3-208ENST00000560371 PPP3R2Q96LZ3 170 aa13.52□□□□□ -0.25
TRAF3-208ENST00000560371 MYBL2P10244 700 aa13.52□□□□□ -0.25
TRAF3-208ENST00000560371 NR2F1P10589 423 aa13.52□□□□□ -0.25
TRAF3-208ENST00000560371 PSMD8P48556 350 aa13.52□□□□□ -0.25
TRAF3-208ENST00000560371 SNX32Q86XE0 403 aa13.52□□□□□ -0.25
TRAF3-208ENST00000560371 C12orf56Q8IXR9 622 aa13.52□□□□□ -0.25
TRAF3-208ENST00000560371 hCG_1818297A0A087WSY0 165 aa13.52□□□□□ -0.25
TRAF3-208ENST00000560371 PTPN2P17706 415 aa13.52□□□□□ -0.25
TRAF3-208ENST00000560371 CXCR3P49682 368 aa13.52□□□□□ -0.25
TRAF3-208ENST00000560371 ELP6Q0PNE2 266 aa13.52□□□□□ -0.25
TRAF3-208ENST00000560371 ZFP1Q6P2D0 407 aa13.52□□□□□ -0.25
TRAF3-208ENST00000560371 ZC3H7AQ8IWR0 971 aaKnown RBP13.52□□□□□ -0.25
TRAF3-208ENST00000560371 P2RY11Q96G91 374 aa13.52□□□□□ -0.25
TRAF3-208ENST00000560371 FAM237AA0A1B0GTK4 181 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 BCLAF3A2AJT9 711 aaKnown RBP13.51□□□□□ -0.25
TRAF3-208ENST00000560371 TSPAN1O60635 241 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 CST3P01034 146 aaPredicted RBP13.51□□□□□ -0.25
TRAF3-208ENST00000560371 ICAM3P32942 547 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 TAPT1Q6NXT6 567 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 CDC73Q6P1J9 531 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 CYP2R1Q6VVX0 501 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 CCDC103Q8IW40 242 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 DSELQ8IZU8 1212 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 DBF4BQ8NFT6 615 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 CDRT15Q96T59 188 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 PDZD7Q9H5P4 517 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 RABGEF1Q9UJ41 708 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 ZMYND8Q9ULU4 1186 aaPredicted RBP13.51□□□□□ -0.25
TRAF3-208ENST00000560371 LINC00854A0A1B0GVQ3 168 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 ERAL1O75616 437 aaKnown RBP13.51□□□□□ -0.25
TRAF3-208ENST00000560371 GPRIN3Q6ZVF9 776 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 SH3BP5LQ7L8J4 393 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 IFNL1Q8IU54 200 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 RAVER1Q8IY67 606 aaKnown RBP13.51□□□□□ -0.25
TRAF3-208ENST00000560371 KLHL5Q96PQ7 755 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 EBNA1BP2Q99848 306 aaKnown RBP13.51□□□□□ -0.25
TRAF3-208ENST00000560371 ACBD6Q9BR61 282 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 SAC3D1A6NKF1 404 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 MAGEA10P43363 369 aaPredicted RBP13.51□□□□□ -0.25
TRAF3-208ENST00000560371 GRIA4P48058 902 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 FAAH2Q6GMR7 532 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 TRAF7Q6Q0C0 670 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 SCAIQ8N9R8 606 aa13.51□□□□□ -0.25
TRAF3-208ENST00000560371 NDRG2Q9UN36 371 aaKnown RBP13.51□□□□□ -0.25
TRAF3-208ENST00000560371 A0A1W2PQ67 120 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms