RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 GPR158Q5T848 1215 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 MARC1Q5VT66 337 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 CLEC6AQ6EIG7 209 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 PIWIL4Q7Z3Z4 852 aaKnown RBP10.1□□□□□ -0.79
LRRC28-216ENST00000559819 ZNF598Q86UK7 904 aaKnown RBP10.1□□□□□ -0.79
LRRC28-216ENST00000559819 LILRA2Q8N149 483 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 ZNF483Q8TF39 744 aaPredicted RBP10.1□□□□□ -0.79
LRRC28-216ENST00000559819 DCUN1D1Q96GG9 259 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 KLHL32Q96NJ5 620 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 PRKD2Q9BZL6 878 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 VCX3BQ9H321 246 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 ALG9Q9H6U8 611 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 PCDHGB4Q9UN71 923 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 CRYL1Q9Y2S2 319 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 PCDHGB5Q9Y5G0 923 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 MYO16Q9Y6X6 1858 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 PATJQ8NI35 1801 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 MANSC4A6NHS7 340 aaPredicted RBP10.1□□□□□ -0.79
LRRC28-216ENST00000559819 WASH4PA8MWX3 477 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 UBFD1O14562 309 aaKnown RBP10.1□□□□□ -0.79
LRRC28-216ENST00000559819 ADAMTS4O75173 837 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 LTA4HP09960 611 aaKnown RBP10.1□□□□□ -0.79
LRRC28-216ENST00000559819 PIRTP0C851 137 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 DNAJB1P25685 340 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 CCND3P30281 292 aaPredicted RBP10.1□□□□□ -0.79
LRRC28-216ENST00000559819 ARPP19P56211 112 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 FOLH1Q04609 750 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 PDK3Q15120 406 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 SETD3Q86TU7 594 aaPredicted RBP10.1□□□□□ -0.79
LRRC28-216ENST00000559819 RTN4RL1Q86UN2 441 aaPredicted RBP10.1□□□□□ -0.79
LRRC28-216ENST00000559819 APLFQ8IW19 511 aaPredicted RBP10.1□□□□□ -0.79
LRRC28-216ENST00000559819 NUP93Q8N1F7 819 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 UMODL1-AS1Q8N2C9 162 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 PELI3Q8N2H9 469 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 ATAD1Q8NBU5 361 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 UROC1Q96N76 676 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 PKP2Q99959 881 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 ZYG11BQ9C0D3 744 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 ZCWPW1Q9H0M4 648 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 EFCAB1Q9HAE3 211 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 SPC25Q9HBM1 224 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 TRPC7Q9HCX4 862 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 ADA2Q9NZK5 511 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 UXTQ9UBK9 157 aaPredicted RBP10.1□□□□□ -0.79
LRRC28-216ENST00000559819 TLR6Q9Y2C9 796 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 ACTL7AQ9Y615 435 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 IPO13O94829 963 aaKnown RBP10.09□□□□□ -0.79
LRRC28-216ENST00000559819 PRSS56P0CW18 603 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 ME2P23368 584 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 YWHAQP27348 245 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 ACVRL1P37023 503 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 CLCN5P51795 746 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 POLE2P56282 527 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 CLLU1OSQ5K130 101 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 AGAP9Q5VTM2 703 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 FBXL22Q6P050 247 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 CILP2Q8IUL8 1156 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 RYBPQ8N488 228 aaPredicted RBP10.09□□□□□ -0.79
LRRC28-216ENST00000559819 ICA1LQ8NDH6 482 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 CEP70Q8NHQ1 597 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 ARRDC2Q8TBH0 407 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 PCDHAC1Q9H158 963 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 UPF3AQ9H1J1 476 aaKnown RBP10.09□□□□□ -0.79
LRRC28-216ENST00000559819 ARNT2Q9HBZ2 717 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 SCML2Q9UQR0 700 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 NOD1Q9Y239 953 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 ATP6AP2A0A1C7CYW4 349 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 LRRC14BA6NHZ5 514 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 TRPC5OSA6NMA1 111 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 MUSKO15146 869 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 SLC22A2O15244 555 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 TADA2AO75478 443 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 ATP6AP2O75787 350 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 FESP07332 822 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 ATXN1LP0C7T5 689 aaKnown RBP10.09□□□□□ -0.79
LRRC28-216ENST00000559819 RHOQP17081 205 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 RENBPP51606 427 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 KPNA2P52292 529 aaKnown RBP10.09□□□□□ -0.79
LRRC28-216ENST00000559819 PSME3P61289 254 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 NRG1Q02297 640 aaPredicted RBP10.09□□□□□ -0.79
LRRC28-216ENST00000559819 RALGDSQ12967 914 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 ADGRE1Q14246 886 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 GALNT3Q14435 633 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 TLR1Q15399 786 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 LAYNQ6UX15 382 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 KIAA0408Q6ZU52 694 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 SPATA24Q86W54 205 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 OR9I1Q8NGQ6 314 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 C1orf74Q96LT6 269 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 TBATAQ96M53 351 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 LRGUKQ96M69 825 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 TRAPPC9Q96Q05 1148 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 GSTO2Q9H4Y5 243 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 FBRSL1Q9HCM7 1045 aaKnown RBP10.09□□□□□ -0.79
LRRC28-216ENST00000559819 TMEM248Q9NWD8 314 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 CCDC167Q9P0B6 97 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.09□□□□□ -0.79
LRRC28-216ENST00000559819 GMPR2Q9P2T1 348 aaKnown RBP10.09□□□□□ -0.79
LRRC28-216ENST00000559819 GIMAP2Q9UG22 337 aa10.09□□□□□ -0.79
LRRC28-216ENST00000559819 RIMS3Q9UJD0 308 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms