RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 SEPT3Q9UH03 358 aa12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 TPX2Q9ULW0 747 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 PCDHA3Q9Y5H8 950 aa12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 CELSR3Q9NYQ7 3312 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 SPAARA0A1B0GVQ0 90 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 TCRBV7S2A1N4TA0A589 114 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 CASC3O15234 703 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 PSTPIP1O43586 416 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 CST8O60676 142 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 JCHAINP01591 159 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 ADRB1P08588 477 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 CTNNA2P26232 953 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 NOVA1P51513 510 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 PFN3P60673 137 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 DYNLT1P63172 113 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 SKOR1P84550 965 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 EIF2B5Q13144 721 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 SLC14A1Q13336 389 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 FZD2Q14332 565 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 PRKD1Q15139 912 aaPredicted RBP12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 SPA17Q15506 151 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 TEAD4Q15561 434 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 WSCD2Q2TBF2 565 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 MARC1Q5VT66 337 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 LIPIQ6XZB0 460 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 SLCO6A1Q86UG4 719 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 LRRC8AQ8IWT6 810 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 HCAR2Q8TDS4 363 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 PTCD2Q8WV60 388 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 PPP1R16AQ96I34 528 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 LENG8Q96PV6 779 aaPredicted RBP12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 TUBGCP5Q96RT8 1024 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 SEMA3CQ99985 751 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 DYRK4Q9NR20 520 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 AASDHPPTQ9NRN7 309 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 RBM22Q9NW64 420 aaKnown RBP eCLIP12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 UCKL1Q9NWZ5 548 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 PCOLCE2Q9UKZ9 415 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 DMTF1Q9Y222 760 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 PPIL1Q9Y3C6 166 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 HEY1Q9Y5J3 304 aa12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 COL5A1P20908 1838 aaPredicted RBP12.73□□□□□ -0.37
RABGGTA-207ENST00000558936 MYLKQ15746 1914 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 NPIPB15A6NHN6 443 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 GOLGA8CPA6NN73 597 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 PRAMEF26H0Y7S4 382 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 K7ESM1 405 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 TSPAN6O43657 245 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 SPOPO43791 374 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 DKK1O94907 266 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 PGLSO95336 258 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 FUCA1P04066 466 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 ALPIP09923 528 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 ZNF883P0CG24 379 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 C6P13671 934 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 CEACAM1P13688 526 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 CCNB1P14635 433 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 HNRNPA2B1P22626 353 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 SERPINB6P35237 376 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 RXRGP48443 463 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 LIG3P49916 1009 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 RPS21P63220 83 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 IFI35P80217 286 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 CCDC15Q0P6D6 951 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 IFI16Q16666 785 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 SETMARQ53H47 684 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 ZNF542PQ5EBM4 170 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 KAZNQ674X7 775 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 KIAA1161Q6NSJ0 714 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 IL27RAQ6UWB1 636 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 Q6ZSR6 202 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 DAAM2Q86T65 1068 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 CCDC13Q8IYE1 715 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 ASB12Q8WXK4 309 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 RAB7BQ96AH8 199 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 HAUS1Q96CS2 278 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 TRIB3Q96RU7 358 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 WDR24Q96S15 920 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 ELF4Q99607 663 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 FAM118BQ9BPY3 351 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 HEMGNQ9BXL5 484 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 KCNF1Q9H3M0 494 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 B4GALT6Q9UBX8 382 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 LCMT1Q9UIC8 334 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 HS3ST3A1Q9Y663 406 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 ZFHX4Q86UP3 3567 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 ASXL3Q9C0F0 2248 aa12.72□□□□□ -0.37
RABGGTA-207ENST00000558936 LY6G6EA0A0G2JKS1 128 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 MACROD2A1Z1Q3 448 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 APOL1O14791 398 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 CER1O95813 267 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 FTCDO95954 541 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 SOD1P00441 154 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 THEGLP0DJG4 465 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 CTPS1P17812 591 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 KCNA4P22459 653 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 PTPN3P26045 913 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 PMLP29590 882 aa12.71□□□□□ -0.37
RABGGTA-207ENST00000558936 NUDT1P36639 197 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms