RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 USP41Q3LFD5 358 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 PIK3CD-AS1Q5SR53 167 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 C6orf141Q5SZD1 244 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 HEPHL1Q6MZM0 1159 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 ZNF280DQ6N043 979 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 CHST9Q7L1S5 443 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 PATL1Q86TB9 770 aaKnown RBP4.59□□□□□ -1.67
CASC4-206ENST00000558847 PRPF39Q86UA1 669 aaKnown RBP4.59□□□□□ -1.67
CASC4-206ENST00000558847 TRIM74Q86UV6 250 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 TRIM73Q86UV7 250 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 LURAP1LQ8IV03 231 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 C17orf53Q8N3J3 647 aaPredicted RBP4.59□□□□□ -1.67
CASC4-206ENST00000558847 LRRC57Q8N9N7 239 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 MPLKIPQ8TAP9 179 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 TMEM163Q8TC26 289 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 PIGOQ8TEQ8 1089 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 ARHGEF26Q96DR7 871 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 MMABQ96EY8 250 aaPredicted RBP4.59□□□□□ -1.67
CASC4-206ENST00000558847 C1orf74Q96LT6 269 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 SLITRK1Q96PX8 696 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 MXRA8Q9BRK3 442 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 C1QTNF1Q9BXJ1 281 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 NUF2Q9BZD4 464 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 B3GNT4Q9C0J1 378 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 KIF9Q9HAQ2 790 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 PLSCR4Q9NRQ2 329 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 ABI3Q9P2A4 366 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 NDRG3Q9UGV2 375 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 CHORDC1Q9UHD1 332 aaPredicted RBP4.59□□□□□ -1.67
CASC4-206ENST00000558847 RPS6KL1Q9Y6S9 549 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 A0A1W2PQF6 199 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 KLRF2D3W0D1 207 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 HSPB6O14558 160 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 TLX3O43711 291 aaPredicted RBP4.58□□□□□ -1.68
CASC4-206ENST00000558847 CNOT3O75175 753 aaKnown RBP4.58□□□□□ -1.68
CASC4-206ENST00000558847 RB1P06400 928 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 PRR35P0CG20 571 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 NR2F1P10589 423 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 TFPIP10646 304 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 SRD5A1P18405 259 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 MYF6P23409 242 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 TNFSF8P32971 234 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 UBA7P41226 1012 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 CLDN2P57739 230 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 GAD2Q05329 585 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 ZNF91Q05481 1191 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 PKP1Q13835 747 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 SMTNL2Q2TAL5 461 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 ZSCAN23Q3MJ62 389 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 RAB41Q5JT25 222 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 GPR139Q6DWJ6 353 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 CES5AQ6NT32 575 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 GLDNQ6ZMI3 551 aaPredicted RBP4.58□□□□□ -1.68
CASC4-206ENST00000558847 FAM217AQ8IXS0 508 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 HORMAD2Q8N7B1 307 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 GJC3Q8NFK1 279 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 VCPIP1Q96JH7 1222 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 PDGFCQ9NRA1 345 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 PLK2Q9NYY3 685 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 RPS6KA6Q9UK32 745 aa4.58□□□□□ -1.68
CASC4-206ENST00000558847 SETD1BQ9UPS6 1966 aaKnown RBP4.57□□□□□ -1.68
CASC4-206ENST00000558847 A0A0U1RQF3 1178 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 SMIM35A0A1B0GVV1 85 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 HSPB2A8KAH6 182 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 ZNF500O60304 480 aaPredicted RBP4.57□□□□□ -1.68
CASC4-206ENST00000558847 TLR2O60603 784 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 ATP2C2O75185 946 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 DAB1O75553 588 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 NDUFB4O95168 129 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 CSPG5O95196 566 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 CLTBP09497 229 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 AKR1B1P15121 316 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 AVPR1AP37288 418 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 EIF2DP41214 584 aaKnown RBP4.57□□□□□ -1.68
CASC4-206ENST00000558847 PIK3CAP42336 1068 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 MRPL12P52815 198 aaKnown RBP4.57□□□□□ -1.68
CASC4-206ENST00000558847 F2RL1P55085 397 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 CDH12P55289 794 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 FAM27E3Q08E93 113 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 ST3GAL1Q11201 340 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 DAZAP2Q15038 168 aaPredicted RBP4.57□□□□□ -1.68
CASC4-206ENST00000558847 ARHGEF6Q15052 776 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 HSPB2Q16082 182 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 NTRK2Q16620 822 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 PCGF3Q3KNV8 242 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 CEP78Q5JTW2 689 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 GKAP1Q5VSY0 366 aaPredicted RBP4.57□□□□□ -1.68
CASC4-206ENST00000558847 JADE1Q6IE81 842 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 LINGO2Q7L985 606 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 TRAPPC11Q7Z392 1133 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 CNGA4Q8IV77 575 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 SFTPA2Q8IWL1 248 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 DHX40Q8IX18 779 aaKnown RBP4.57□□□□□ -1.68
CASC4-206ENST00000558847 RNF168Q8IYW5 571 aaPredicted RBP4.57□□□□□ -1.68
CASC4-206ENST00000558847 RBFAQ8N0V3 343 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 BEST2Q8NFU1 509 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 PRSS3P2Q8NHM4 247 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 SLC35F5Q8WV83 523 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 SNAPC3Q92966 411 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 YME1L1Q96TA2 773 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms