RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 KATNAL2Q8IYT4 538 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 SYCE1Q8N0S2 351 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 RNF10Q8N5U6 811 aaKnown RBP8.55□□□□□ -1.04
TPM1-213ENST00000558400 PLD5Q8N7P1 536 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 NETO2Q8NC67 525 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 CCDC112Q8NEF3 446 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 EXD1Q8NHP7 514 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 MAML1Q92585 1016 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 VOPP1Q96AW1 172 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 HDAC11Q96DB2 347 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 ECHDC3Q96DC8 303 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 RBM41Q96IZ5 413 aaKnown RBP8.55□□□□□ -1.04
TPM1-213ENST00000558400 CDC6Q99741 560 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 POLR1EQ9GZS1 481 aaKnown RBP8.55□□□□□ -1.04
TPM1-213ENST00000558400 FSCN3Q9NQT6 498 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 KLHL11Q9NVR0 708 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 RBM22Q9NW64 420 aaKnown RBP eCLIP8.55□□□□□ -1.04
TPM1-213ENST00000558400 DTLQ9NZJ0 730 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 PHTF1Q9UMS5 762 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 EFR3BQ9Y2G0 817 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 ATP8A1Q9Y2Q0 1164 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 PCDHA3Q9Y5H8 950 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 CACNA1EQ15878 2313 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 KNL1Q8NG31 2342 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 FLNBO75369 2602 aaKnown RBP8.55□□□□□ -1.04
TPM1-213ENST00000558400 ZZEF1O43149 2961 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 CCDC66A2RUB6 948 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 A6NNZ2 444 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 H0Y8X5 98 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 WNT9AO14904 365 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 MUSKO15146 869 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 MTSS1O43312 755 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 HTRA2O43464 458 aaPredicted RBP8.54□□□□□ -1.04
TPM1-213ENST00000558400 MFSD11O43934 449 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 LZTS3O60299 673 aaPredicted RBP8.54□□□□□ -1.04
TPM1-213ENST00000558400 MMP20O60882 483 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 TRIM16O95361 564 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 PIGNO95427 931 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 WNT1P04628 370 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 ITGAVP06756 1048 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 THEGLP0DJG4 465 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 PRLRP16471 622 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 TGM2P21980 687 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 ABL2P42684 1182 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 CDKN2BP42772 138 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 GRK6P43250 576 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 RGRP47804 291 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 PEX5P50542 639 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 YPEL5P62699 121 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 FAM193AP78312 1265 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 GBE1Q04446 702 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 PPIDQ08752 370 aaKnown RBP8.54□□□□□ -1.04
TPM1-213ENST00000558400 SLC10A2Q12908 348 aaPredicted RBP8.54□□□□□ -1.04
TPM1-213ENST00000558400 PTK2BQ14289 1009 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 AGERQ15109 404 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 TRIP6Q15654 476 aaKnown RBP8.54□□□□□ -1.04
TPM1-213ENST00000558400 TAZQ16635 292 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 ARMC12Q5T9G4 340 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 SEL1L3Q68CR1 1132 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 ALG1LQ6GMV1 187 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 PSAPL1Q6NUJ1 521 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 MFSD7Q6UXD7 560 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 UNQ6494/PRO21346Q6UXR6 183 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 Q6ZSR6 202 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 ABI3BPQ7Z7G0 1075 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 OR2I1PQ8NGU4 316 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 RHBDD1Q8TEB9 315 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 SETD7Q8WTS6 366 aaKnown RBP8.54□□□□□ -1.04
TPM1-213ENST00000558400 P3H4Q92791 437 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 KLK6Q92876 244 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 CENPTQ96BT3 561 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 BMFQ96LC9 184 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 SEMA3CQ99985 751 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 FERMT1Q9BQL6 677 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 TSGA10Q9BZW7 698 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 NOD2Q9HC29 1040 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 NT5MQ9NPB1 228 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 PCDH12Q9NPG4 1184 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 DNPEPQ9ULA0 475 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 FNDC3AQ9Y2H6 1198 aaKnown RBP8.54□□□□□ -1.04
TPM1-213ENST00000558400 PPIL1Q9Y3C6 166 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 HEY1Q9Y5J3 304 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 SLCO1B1Q9Y6L6 691 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 PCNX2A6NKB5 2137 aa8.54□□□□□ -1.04
TPM1-213ENST00000558400 GCN1Q92616 2671 aaKnown RBP8.53□□□□□ -1.04
TPM1-213ENST00000558400 RCCD1A6NED2 376 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 NEMP2A6NFY4 417 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 MIF4GDA9UHW6 222 aaKnown RBP8.53□□□□□ -1.04
TPM1-213ENST00000558400 C1QTNF9BB2RNN3 333 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 KCNK3O14649 394 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 ARHGAP6O43182 974 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 KRT86O43790 486 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 SH3BP5O60239 455 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 CST8O60676 142 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 ZNF189O75820 626 aaPredicted RBP8.53□□□□□ -1.04
TPM1-213ENST00000558400 JCHAINP01591 159 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 C1QTNF9P0C862 333 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 CYP2A6P11509 494 aaPredicted RBP8.53□□□□□ -1.04
TPM1-213ENST00000558400 CDK4P11802 303 aa8.53□□□□□ -1.04
TPM1-213ENST00000558400 CTNNA1P35221 906 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms