RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 PDE2AO00408 941 aaPredicted RBP5.23□□□□□ -1.57
SPG11-208ENST00000558155 TNFRSF10CO14798 259 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 AREL1O15033 823 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 NKX2-8O15522 239 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 RAD1O60671 282 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 SRGAP2O75044 1071 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 DDAH2O95865 285 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 GSRP00390 522 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 F13A1P00488 732 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 UGT2B4P06133 528 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 ZSCAN22P10073 491 aaPredicted RBP5.23□□□□□ -1.57
SPG11-208ENST00000558155 FGF3P11487 239 aaPredicted RBP5.23□□□□□ -1.57
SPG11-208ENST00000558155 SNRPBP14678 240 aaKnown RBP5.23□□□□□ -1.57
SPG11-208ENST00000558155 TIMP2P16035 220 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 KELP23276 732 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 ALDH4A1P30038 563 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 GNA15P30679 374 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 GKP32189 559 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 CSTF2P33240 577 aaKnown RBP eCLIP5.23□□□□□ -1.57
SPG11-208ENST00000558155 MAN1A1P33908 653 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 PRCPP42785 496 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 NOP2P46087 812 aaKnown RBP5.23□□□□□ -1.57
SPG11-208ENST00000558155 CXCR3P49682 368 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 COPB1P53618 953 aaKnown RBP5.23□□□□□ -1.57
SPG11-208ENST00000558155 LIMK2P53671 638 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 MLLT10P55197 1068 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 OR1D5P58170 312 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 ARF5P84085 180 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 B4GALNT1Q00973 533 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 SLC6A3Q01959 620 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 GNA12Q03113 381 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 DEUP1Q05D60 604 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 ELP6Q0PNE2 266 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 PDCLQ13371 301 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 PEX6Q13608 980 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 INPP5AQ14642 412 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 NFATC4Q14934 902 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 TCEA2Q15560 299 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 WSCD2Q2TBF2 565 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 DEFB109BQ30KR1 87 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 AMZ1Q400G9 498 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 TMEM52BQ4KMG9 183 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 EFHC2Q5JST6 749 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 DCAF12Q5T6F0 453 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 HIST2H2BCQ6DN03 193 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 GDPD4Q6W3E5 623 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 KRBA2Q6ZNG9 492 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 TFAP2DQ7Z6R9 452 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 HEATR4Q86WZ0 1026 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 AGBL5Q8NDL9 886 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 ZNF397Q8NF99 534 aaPredicted RBP5.23□□□□□ -1.57
SPG11-208ENST00000558155 OR2AP1Q8NGE2 309 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 LMO3Q8TAP4 145 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 KIAA1524Q8TCG1 905 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 HCAR2Q8TDS4 363 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 SSC4DQ8WTU2 575 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 KAT5Q92993 513 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 FAM81BQ96LP2 452 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 TEFMQ96QE5 360 aaKnown RBP5.23□□□□□ -1.57
SPG11-208ENST00000558155 DPYSL5Q9BPU6 564 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 DDA1Q9BW61 102 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 GTPBP4Q9BZE4 634 aaKnown RBP5.23□□□□□ -1.57
SPG11-208ENST00000558155 TM6SF2Q9BZW4 377 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 ZYG11BQ9C0D3 744 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 INTS2Q9H0H0 1204 aaKnown RBP5.23□□□□□ -1.57
SPG11-208ENST00000558155 TRIT1Q9H3H1 467 aaKnown RBP5.23□□□□□ -1.57
SPG11-208ENST00000558155 RETREG1Q9H6L5 497 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 GPN2Q9H9Y4 310 aaPredicted RBP5.23□□□□□ -1.57
SPG11-208ENST00000558155 UBE2TQ9NPD8 197 aaPredicted RBP5.23□□□□□ -1.57
SPG11-208ENST00000558155 PRDM8Q9NQV8 689 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 RMND1Q9NWS8 449 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 SLC39A1Q9NY26 324 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.23□□□□□ -1.57
SPG11-208ENST00000558155 DKK3Q9UBP4 350 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 STAP1Q9ULZ2 295 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 HPSEQ9Y251 543 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 ITM2BQ9Y287 266 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 DOCK4Q8N1I0 1966 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 NOTCH2Q04721 2471 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 ATMQ13315 3056 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 ESPL1Q14674 2120 aa5.23□□□□□ -1.57
SPG11-208ENST00000558155 SPTBN1Q01082 2364 aaKnown RBP5.22□□□□□ -1.57
SPG11-208ENST00000558155 IGLV3-10A0A075B6K4 115 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 IGHV5-10-1A0A0J9YXX1 117 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 TTLL8A6PVC2 850 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 B4E171 279 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 MKRN2OSH3BPM6 223 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 DAB1O75553 588 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 ZNF202O95125 648 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 KRT7P08729 469 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 HOXC4P09017 264 aaPredicted RBP5.22□□□□□ -1.57
SPG11-208ENST00000558155 PRKAR1AP10644 381 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 ITIH2P19823 946 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 TCN2P20062 427 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 USP8P40818 1118 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 TSPAN7P41732 249 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 GPR3P46089 330 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 SULT1E1P49888 294 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 NDUFA8P51970 172 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 RAB15P59190 212 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms