RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 SRLQ86TD4 932 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 CAMK1DQ8IU85 385 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 HID1Q8IV36 788 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 PSTKQ8IV42 348 aaKnown RBP14.75□□□□□ -0.05
SHMT2-235ENST00000557740 LSMEM2Q8N112 164 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 ARFGAP1Q8N6T3 406 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 TSEN2Q8NCE0 465 aaKnown RBP14.75□□□□□ -0.05
SHMT2-235ENST00000557740 ATL2Q8NHH9 583 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 SCG3Q8WXD2 468 aaKnown RBP14.75□□□□□ -0.05
SHMT2-235ENST00000557740 ZNF578Q96N58 590 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-235ENST00000557740 LGMNQ99538 433 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 BOCQ9BWV1 1114 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 TRIM7Q9C029 511 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 SYNDIG1Q9H7V2 258 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 ZWILCHQ9H900 591 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 POLR1BQ9H9Y6 1135 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 AIPL1Q9NZN9 384 aa14.75□□□□□ -0.05
SHMT2-235ENST00000557740 PNMA8BQ9ULN7 279 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-235ENST00000557740 A0A1B0GTH6 734 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 EME2A4GXA9 379 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-235ENST00000557740 DDX3XO00571 662 aaKnown RBP eCLIP14.74□□□□□ -0.058e-15■■□□□ 14.3
SHMT2-235ENST00000557740 LRCH4O75427 683 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 RASGRP1O95267 797 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 SERPINC1P01008 464 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 PRKCGP05129 697 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 PCCBP05166 539 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 ALPIP09923 528 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 CTSEP14091 401 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 TSHRP16473 764 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 TGM2P21980 687 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 RGRP47804 291 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 LSSP48449 732 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 LIG3P49916 1009 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 HK3P52790 923 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 BCL2L1Q07817 233 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 RFTN1Q14699 578 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-235ENST00000557740 NFATC4Q14934 902 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 ISXQ2M1V0 245 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 TDRD12Q587J7 1177 aaKnown RBP14.74□□□□□ -0.05
SHMT2-235ENST00000557740 AFMIDQ63HM1 303 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 CAVIN1Q6NZI2 390 aaKnown RBP14.74□□□□□ -0.05
SHMT2-235ENST00000557740 CRTC1Q6UUV9 634 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 RBM44Q6ZP01 1051 aaKnown RBP14.74□□□□□ -0.05
SHMT2-235ENST00000557740 ARHGAP12Q8IWW6 846 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 SLC35F3Q8IY50 421 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 NPWQ8N729 165 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 PCDH19Q8TAB3 1148 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 FCRL3Q96P31 734 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-235ENST00000557740 CLPBQ9H078 707 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 MRPL47Q9HD33 250 aaKnown RBP14.74□□□□□ -0.05
SHMT2-235ENST00000557740 MYO1AQ9UBC5 1043 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 KLQ9UEF7 1012 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 OR1A2Q9Y585 309 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 PTPRQQ9UMZ3 2332 aa14.74□□□□□ -0.05
SHMT2-235ENST00000557740 MYLKQ15746 1914 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 H3BRJ5 948 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 YY2O15391 372 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 TCEA3O75764 348 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 ELFN1P0C7U0 828 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 ARL4AP40617 200 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 HCAR3P49019 387 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 RENBPP51606 427 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 AP1S1P61966 158 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 IL10RBQ08334 325 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 MTM1Q13496 603 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 DPYSQ14117 519 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 ZNF235Q14590 738 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 INPP5AQ14642 412 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 TCEA2Q15560 299 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 ALG11Q2TAA5 492 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 C3orf38Q5JPI3 329 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 PERM1Q5SV97 790 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 TMCO4Q5TGY1 634 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 ARHGAP36Q6ZRI8 547 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 CYP4V2Q6ZWL3 525 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-235ENST00000557740 RD3Q7Z3Z2 195 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 ZSWIM9Q86XI8 627 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 SPACA3Q8IXA5 215 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 LZTR1Q8N653 840 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 ZNF248Q8NDW4 579 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 WDR48Q8TAF3 677 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 TSACCQ96A04 125 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-235ENST00000557740 GRAMD1AQ96CP6 724 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 NAP1L5Q96NT1 182 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-235ENST00000557740 UBL7Q96S82 380 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-235ENST00000557740 APOOQ9BUR5 198 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 PRORYQ9H606 182 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 THSD1Q9NS62 852 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 CWC15Q9P013 229 aaKnown RBP14.73□□□□□ -0.05
SHMT2-235ENST00000557740 SEPT3Q9UH03 358 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 PADI4Q9UM07 663 aa14.73□□□□□ -0.05
SHMT2-235ENST00000557740 DXOO77932 396 aaKnown RBP14.72□□□□□ -0.05
SHMT2-235ENST00000557740 CELA2BP08218 269 aaPredicted RBP14.72□□□□□ -0.05
SHMT2-235ENST00000557740 SKILP12757 684 aa14.72□□□□□ -0.05
SHMT2-235ENST00000557740 PCK1P35558 622 aa14.72□□□□□ -0.05
SHMT2-235ENST00000557740 SCNN1BP51168 640 aa14.72□□□□□ -0.05
SHMT2-235ENST00000557740 ERVPABLB-1P60509 514 aa14.72□□□□□ -0.05
SHMT2-235ENST00000557740 SRP54P61011 504 aaKnown RBP14.72□□□□□ -0.05
SHMT2-235ENST00000557740 POLR2LP62875 67 aaKnown RBP14.72□□□□□ -0.05
SHMT2-235ENST00000557740 TPM4P67936 248 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms