RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 XPAP23025 273 aaPredicted RBP16.08■□□□□ 0.16
SCFD1-224ENST00000557713 NFATC4Q14934 902 aa16.08■□□□□ 0.16
SCFD1-224ENST00000557713 SYCP1Q15431 976 aa16.08■□□□□ 0.16
SCFD1-224ENST00000557713 ENPP7Q6UWV6 458 aa16.08■□□□□ 0.16
SCFD1-224ENST00000557713 KYQ8NBH2 561 aa16.08■□□□□ 0.16
SCFD1-224ENST00000557713 PCDH19Q8TAB3 1148 aa16.08■□□□□ 0.16
SCFD1-224ENST00000557713 LIN37Q96GY3 246 aaPredicted RBP16.08■□□□□ 0.16
SCFD1-224ENST00000557713 ZNF641Q96N77 438 aaPredicted RBP16.08■□□□□ 0.16
SCFD1-224ENST00000557713 AGPAT1Q99943 283 aa16.08■□□□□ 0.16
SCFD1-224ENST00000557713 NCAPGQ9BPX3 1015 aa16.08■□□□□ 0.16
SCFD1-224ENST00000557713 CNPY3Q9BT09 278 aa16.08■□□□□ 0.16
SCFD1-224ENST00000557713 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.08■□□□□ 0.16
SCFD1-224ENST00000557713 UBA2Q9UBT2 640 aaPredicted RBP16.08■□□□□ 0.16
SCFD1-224ENST00000557713 DOLKQ9UPQ8 538 aa16.08■□□□□ 0.16
SCFD1-224ENST00000557713 ZNF462Q96JM2 2506 aa16.08■□□□□ 0.16
SCFD1-224ENST00000557713 RP1P56715 2156 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 FGF10O15520 208 aaPredicted RBP16.07■□□□□ 0.16
SCFD1-224ENST00000557713 PRAMEF11O60813 436 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 TPM2P07951 284 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 ITGA2BP08514 1039 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 HTR1BP28222 390 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 CSNK1DP48730 415 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 LIG3P49916 1009 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 NDST2P52849 883 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 COPB1P53618 953 aaKnown RBP16.07■□□□□ 0.16
SCFD1-224ENST00000557713 SRP54P61011 504 aaKnown RBP16.07■□□□□ 0.16
SCFD1-224ENST00000557713 CCL7P80098 99 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 CLN3Q13286 438 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 LY6DQ14210 128 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 KCTD16Q68DU8 428 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 ERAP2Q6P179 960 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 DNAJC24Q6P3W2 148 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 BRAT1Q6PJG6 821 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 RD3Q7Z3Z2 195 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 B3GNT8Q7Z7M8 397 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 ZSWIM9Q86XI8 627 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 GKN2Q86XP6 184 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 CAMK1DQ8IU85 385 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 NEK11Q8NG66 645 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 CCDC74AQ96AQ1 378 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 MCEEQ96PE7 176 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 SIRPGQ9P1W8 387 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 GPR34Q9UPC5 381 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 OR1A2Q9Y585 309 aa16.07■□□□□ 0.16
SCFD1-224ENST00000557713 TENM4Q6N022 2769 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 A0A1W2PQM1 296 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 CFAP69A5D8W1 941 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 ANKRD62A6NC57 917 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 PLD2O14939 933 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 HTR7P34969 479 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 MMP12P39900 470 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 RGRP47804 291 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 OGDHQ02218 1023 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 MTM1Q13496 603 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 TCEA2Q15560 299 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 OGFOD3Q6PK18 319 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 CCDC81Q6ZN84 652 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 SRLQ86TD4 932 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 PLA2G15Q8NCC3 412 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 OR6C4Q8NGE1 309 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 WDR92Q96MX6 357 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 GFM1Q96RP9 751 aaKnown RBP16.06■□□□□ 0.16
SCFD1-224ENST00000557713 TUBGCP5Q96RT8 1024 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 RBM15Q96T37 977 aaKnown RBP eCLIP16.06■□□□□ 0.16
SCFD1-224ENST00000557713 SYNDIG1Q9H7V2 258 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 KLQ9UEF7 1012 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 LIMA1Q9UHB6 759 aaKnown RBP16.06■□□□□ 0.16
SCFD1-224ENST00000557713 ATP8A1Q9Y2Q0 1164 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 PCDHGA7Q9Y5G6 932 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 DGKBQ9Y6T7 804 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 LRRK1Q38SD2 2015 aa16.06■□□□□ 0.16
SCFD1-224ENST00000557713 LRRC10BA6NIK2 292 aa16.05■□□□□ 0.16
SCFD1-224ENST00000557713 D6RAR5 112 aa16.05■□□□□ 0.16
SCFD1-224ENST00000557713 TMX2-CTNND1H3BSU7 103 aa16.05■□□□□ 0.16
SCFD1-224ENST00000557713 J3QKU1 62 aa16.05■□□□□ 0.16
SCFD1-224ENST00000557713 EFSO43281 561 aa16.05■□□□□ 0.16
SCFD1-224ENST00000557713 TNFP01375 233 aa16.05■□□□□ 0.16
SCFD1-224ENST00000557713 PRKCGP05129 697 aa16.05■□□□□ 0.16
SCFD1-224ENST00000557713 UGT1A5P35504 534 aa16.05■□□□□ 0.16
SCFD1-224ENST00000557713 PAPOLAP51003 745 aaKnown RBP16.05■□□□□ 0.16
SCFD1-224ENST00000557713 EIF3IQ13347 325 aaKnown RBP16.05■□□□□ 0.16
SCFD1-224ENST00000557713 KIAA1614Q5VZ46 1190 aa16.05■□□□□ 0.16
SCFD1-224ENST00000557713 ACAD10Q6JQN1 1059 aa16.05■□□□□ 0.16
SCFD1-224ENST00000557713 RAB11FIP2Q7L804 512 aa16.05■□□□□ 0.16
SCFD1-224ENST00000557713 MCOLN2Q8IZK6 566 aa16.05■□□□□ 0.16
SCFD1-224ENST00000557713 FBXO39Q8N4B4 442 aa16.05■□□□□ 0.16
SCFD1-224ENST00000557713 TSEN2Q8NCE0 465 aaKnown RBP16.05■□□□□ 0.16
SCFD1-224ENST00000557713 GPR156Q8NFN8 814 aa16.05■□□□□ 0.16
SCFD1-224ENST00000557713 ATL2Q8NHH9 583 aa16.05■□□□□ 0.16
SCFD1-224ENST00000557713 CELF6Q96J87 481 aaKnown RBP16.05■□□□□ 0.16
SCFD1-224ENST00000557713 PCMTD1Q96MG8 357 aaPredicted RBP16.05■□□□□ 0.16
SCFD1-224ENST00000557713 SLC39A8Q9C0K1 460 aa16.05■□□□□ 0.16
SCFD1-224ENST00000557713 LRRN3Q9H3W5 708 aa16.05■□□□□ 0.16
SCFD1-224ENST00000557713 EPB41L5Q9HCM4 733 aa16.05■□□□□ 0.16
SCFD1-224ENST00000557713 ASH1LQ9NR48 2969 aaKnown RBP16.05■□□□□ 0.16
SCFD1-224ENST00000557713 SEPT11Q9NVA2 429 aaKnown RBP16.05■□□□□ 0.16
SCFD1-224ENST00000557713 GPATCH2LQ9NWQ4 482 aa16.05■□□□□ 0.16
SCFD1-224ENST00000557713 DONSONQ9NYP3 566 aa16.05■□□□□ 0.16
SCFD1-224ENST00000557713 LRP4O75096 1905 aa16.05■□□□□ 0.16
SCFD1-224ENST00000557713 KIF26BQ2KJY2 2108 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms