RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 RAI2Q9Y5P3 530 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 DMDP11532 3685 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 ZNF292O60281 2723 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 CTAGE9A4FU28 777 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 PRAMEF26H0Y7S4 382 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 PSMD3O43242 534 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 PIGNO95427 931 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 IGHV4-34P06331 123 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 ZNF30P17039 623 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 RBL1P28749 1068 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 GKP32189 559 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 MPLP40238 635 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 GRIA4P48058 902 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 AFF3P51826 1226 aaKnown RBP13.78□□□□□ -0.2
SHMT2-234ENST00000557703 METAP1P53582 386 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 MAXP61244 160 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 CREB5Q02930 508 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 SGCGQ13326 291 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 PRPSAP1Q14558 356 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 TEAD4Q15561 434 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 LONRF2Q1L5Z9 754 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 P3H1Q32P28 736 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 TMEM259Q4ZIN3 620 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 AADACL2Q6P093 401 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 DCP2Q8IU60 420 aaKnown RBP13.78□□□□□ -0.2
SHMT2-234ENST00000557703 RGL4Q8IZJ4 473 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 ZNF567Q8N184 647 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 C1orf216Q8TAB5 229 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 CXorf40AQ8TE69 158 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 SPATA13Q96N96 652 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 MCCC1Q96RQ3 725 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-234ENST00000557703 OSBPL9Q96SU4 736 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 NAPGQ99747 312 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-234ENST00000557703 C1QTNF2Q9BXJ5 285 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 SLC17A9Q9BYT1 436 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 PCDH9Q9HC56 1237 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 CD93Q9NPY3 652 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 TTLL3Q9Y4R7 772 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 PCDHB9Q9Y5E1 797 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 HS3ST3A1Q9Y663 406 aa13.78□□□□□ -0.2
SHMT2-234ENST00000557703 GOLGA6L10A0A0M3HER8 536 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 FAM47DPA6NHR8 397 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 ERI2A8K979 691 aaKnown RBP13.77□□□□□ -0.21
SHMT2-234ENST00000557703 ANKRD66B4E2M5 251 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 PGRMC1O00264 195 aaKnown RBP13.77□□□□□ -0.21
SHMT2-234ENST00000557703 ENC1O14682 589 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 BCAT2O15382 392 aaPredicted RBP13.77□□□□□ -0.21
SHMT2-234ENST00000557703 KCNN4O15554 427 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 LIASO43766 372 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 DFNA5O60443 496 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 FSBPO95073 299 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 CPP00450 1065 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 SYPP08247 313 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 ITPKAP23677 461 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 AKT2P31751 481 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 MMP12P39900 470 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 EPHB1P54762 984 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 GEMP55040 296 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 ETF1P62495 437 aaKnown RBP13.77□□□□□ -0.21
SHMT2-234ENST00000557703 SKOR1P84550 965 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 DSC2Q02487 901 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 NIPAL4Q0D2K0 466 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 OASLQ15646 514 aaKnown RBP13.77□□□□□ -0.21
SHMT2-234ENST00000557703 PARP6Q2NL67 630 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 POM121L1PQ3SYA9 428 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 ANKRD20A2Q5SQ80 823 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 ANKRD20A1Q5TYW2 823 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 ANKRD20A3Q5VUR7 823 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 RALGAPA1Q6GYQ0 2036 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 NAPEPLDQ6IQ20 393 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 IL27RAQ6UWB1 636 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 DPPA4Q7L190 304 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 NLRP8Q86W28 1048 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 PIH1D2Q8WWB5 315 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 C19orf43Q9BQ61 176 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 NUSAP1Q9BXS6 441 aaKnown RBP13.77□□□□□ -0.21
SHMT2-234ENST00000557703 CDH19Q9H159 772 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 GBA3Q9H227 469 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 PCDH12Q9NPG4 1184 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 SLC6A14Q9UN76 642 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 ZNF148Q9UQR1 794 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 SAR1BQ9Y6B6 198 aa13.77□□□□□ -0.21
SHMT2-234ENST00000557703 ANKRD36A6QL64 1941 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 A0A0J9YYE9 177 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 A0A1W2PQU0 124 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 RGSL1A5PLK6 1076 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 USP27XA6NNY8 438 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 KIF2AO00139 706 aaPredicted RBP13.76□□□□□ -0.21
SHMT2-234ENST00000557703 KHNYNO15037 678 aaKnown RBP13.76□□□□□ -0.21
SHMT2-234ENST00000557703 GFRA3O60609 400 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 TM7SF2O76062 418 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 TRBC1P01850 177 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 ATP1A1P05023 1023 aaKnown RBP13.76□□□□□ -0.21
SHMT2-234ENST00000557703 MMP2P08253 660 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 HNRNPA2B1P22626 353 aaKnown RBP13.76□□□□□ -0.21
SHMT2-234ENST00000557703 CD86P42081 329 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 ABL2P42684 1182 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 CDK18Q07002 472 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 TRAF2Q12933 501 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 ZNF284Q2VY69 593 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms