RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 ITKQ08881 620 aa12.6□□□□□ -0.39
SLIRP-211ENST00000557623 SLC10A2Q12908 348 aaPredicted RBP12.6□□□□□ -0.39
SLIRP-211ENST00000557623 KIF19Q2TAC6 998 aa12.6□□□□□ -0.39
SLIRP-211ENST00000557623 HLA-BQ31612 363 aa12.6□□□□□ -0.39
SLIRP-211ENST00000557623 TMEM52BQ4KMG9 183 aa12.6□□□□□ -0.39
SLIRP-211ENST00000557623 SEL1L3Q68CR1 1132 aa12.6□□□□□ -0.39
SLIRP-211ENST00000557623 ERMP1Q7Z2K6 904 aa12.6□□□□□ -0.39
SLIRP-211ENST00000557623 CCDC50Q8IVM0 306 aa12.6□□□□□ -0.39
SLIRP-211ENST00000557623 PGBD5Q8N414 524 aa12.6□□□□□ -0.39
SLIRP-211ENST00000557623 TMEM145Q8NBT3 493 aa12.6□□□□□ -0.39
SLIRP-211ENST00000557623 KLK6Q92876 244 aa12.6□□□□□ -0.39
SLIRP-211ENST00000557623 ECHDC3Q96DC8 303 aa12.6□□□□□ -0.39
SLIRP-211ENST00000557623 C1QTNF7Q9BXJ2 289 aa12.6□□□□□ -0.39
SLIRP-211ENST00000557623 NT5MQ9NPB1 228 aa12.6□□□□□ -0.39
SLIRP-211ENST00000557623 RBM22Q9NW64 420 aaKnown RBP eCLIP12.6□□□□□ -0.397e-6■■■□□ 17.4
SLIRP-211ENST00000557623 AMFRQ9UKV5 643 aa12.6□□□□□ -0.39
SLIRP-211ENST00000557623 PCDHA3Q9Y5H8 950 aa12.6□□□□□ -0.39
SLIRP-211ENST00000557623 SNX11Q9Y5W9 270 aa12.6□□□□□ -0.39
SLIRP-211ENST00000557623 HS3ST3A1Q9Y663 406 aa12.6□□□□□ -0.39
SLIRP-211ENST00000557623 ASCC3Q8N3C0 2202 aaKnown RBP12.6□□□□□ -0.39
SLIRP-211ENST00000557623 MACROD2A1Z1Q3 448 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 DCDC2BA2VCK2 349 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 GRID2IPA4D2P6 1211 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 IGLON5A6NGN9 336 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 TRAFD1O14545 582 aaPredicted RBP12.59□□□□□ -0.39
SLIRP-211ENST00000557623 HTRA2O43464 458 aaPredicted RBP12.59□□□□□ -0.39
SLIRP-211ENST00000557623 KRT86O43790 486 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 CST8O60676 142 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 GJB3O75712 270 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 TM7SF2O76062 418 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 PAK4O96013 591 aaPredicted RBP12.59□□□□□ -0.39
SLIRP-211ENST00000557623 WNT1P04628 370 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 PRLRP16471 622 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 CSRP1P21291 193 aaKnown RBP12.59□□□□□ -0.39
SLIRP-211ENST00000557623 CA4P22748 312 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 RWDD2BP57060 319 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 MAXP61244 160 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 DYNLT1P63172 113 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 AP1B1Q10567 949 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 PPP2R5EQ16537 467 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 ZNF423Q2M1K9 1284 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 KAZNQ674X7 775 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 LAYNQ6UX15 382 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 PEX26Q7Z412 305 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 LRRC8AQ8IWT6 810 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 OXR1Q8N573 874 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 RNF10Q8N5U6 811 aaKnown RBP12.59□□□□□ -0.39
SLIRP-211ENST00000557623 LRRC57Q8N9N7 239 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 DENND6BQ8NEG7 585 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 UBE2Q2Q8WVN8 375 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 KRT35Q92764 455 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 KLHDC7BQ96G42 594 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 OLFM3Q96PB7 478 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 LENG8Q96PV6 779 aaPredicted RBP12.59□□□□□ -0.39
SLIRP-211ENST00000557623 PRR14Q9BWN1 585 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 C1QTNF2Q9BXJ5 285 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 SLC32A1Q9H598 525 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 PCDH12Q9NPG4 1184 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 GDF3Q9NR23 364 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 PLA2G2EQ9NZK7 142 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 ITM2BQ9Y287 266 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 ATP8A1Q9Y2Q0 1164 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 CFAP54Q96N23 3096 aa12.59□□□□□ -0.39
SLIRP-211ENST00000557623 hCG_1818297A0A087WSY0 165 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 CFAP69A5D8W1 941 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 A6NNZ2 444 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 MIF4GDA9UHW6 222 aaKnown RBP12.58□□□□□ -0.4
SLIRP-211ENST00000557623 FPGTO14772 594 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 WNT9AO14904 365 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 YKT6O15498 198 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 SPINT1O43278 529 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 KRT10P13645 584 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 MARCKSL1P49006 195 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 CCT8P50990 548 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 NXPH1P58417 271 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 IFI35P80217 286 aaPredicted RBP12.58□□□□□ -0.4
SLIRP-211ENST00000557623 SUZ12Q15022 739 aaKnown RBP12.58□□□□□ -0.4
SLIRP-211ENST00000557623 LRRC73Q5JTD7 316 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 ALG1LQ6GMV1 187 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 ABI3BPQ7Z7G0 1075 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 NT5DC3Q86UY8 548 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 DCP2Q8IU60 420 aaKnown RBP12.58□□□□□ -0.4
SLIRP-211ENST00000557623 NDUFAF2Q8N183 169 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 UBL4BQ8N7F7 174 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 OR2I1PQ8NGU4 316 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 PDCD6IPQ8WUM4 868 aaKnown RBP12.58□□□□□ -0.4
SLIRP-211ENST00000557623 P3H4Q92791 437 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 LGMNQ99538 433 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 IL12RB2Q99665 862 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 SEMA3CQ99985 751 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 ERVMER34-1Q9H9K5 563 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 NOD2Q9HC29 1040 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 TM7SF3Q9NS93 570 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 TRIM10Q9UDY6 481 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 GGT7Q9UJ14 662 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 PHTF1Q9UMS5 762 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 EFR3BQ9Y2G0 817 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 TTLL3Q9Y4R7 772 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 PCDHGC4Q9Y5F7 938 aa12.58□□□□□ -0.4
SLIRP-211ENST00000557623 PCDHGB2Q9Y5G2 931 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms