RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 CR2P20023 1033 aa18.5■□□□□ 0.55
ABCD4-228ENST00000557588 CLCN1P35523 988 aa18.5■□□□□ 0.55
ABCD4-228ENST00000557588 POLE2P56282 527 aa18.5■□□□□ 0.55
ABCD4-228ENST00000557588 FOXK1P85037 733 aa18.5■□□□□ 0.55
ABCD4-228ENST00000557588 ELP6Q0PNE2 266 aa18.5■□□□□ 0.55
ABCD4-228ENST00000557588 KCNAB2Q13303 367 aa18.5■□□□□ 0.55
ABCD4-228ENST00000557588 INPP5AQ14642 412 aa18.5■□□□□ 0.55
ABCD4-228ENST00000557588 C16orf72Q14CZ0 275 aa18.5■□□□□ 0.55
ABCD4-228ENST00000557588 PHF19Q5T6S3 580 aa18.5■□□□□ 0.55
ABCD4-228ENST00000557588 TMEM164Q5U3C3 297 aa18.5■□□□□ 0.55
ABCD4-228ENST00000557588 GBP6Q6ZN66 633 aa18.5■□□□□ 0.55
ABCD4-228ENST00000557588 ARCQ7LC44 396 aa18.5■□□□□ 0.55
ABCD4-228ENST00000557588 C18orf8Q96DM3 657 aa18.5■□□□□ 0.55
ABCD4-228ENST00000557588 DNAI1Q9UI46 699 aa18.5■□□□□ 0.55
ABCD4-228ENST00000557588 TMEM59LQ9UK28 342 aa18.5■□□□□ 0.55
ABCD4-228ENST00000557588 COQ6Q9Y2Z9 468 aa18.5■□□□□ 0.55
ABCD4-228ENST00000557588 SPTAN1Q13813 2472 aaKnown RBP18.49■□□□□ 0.55
ABCD4-228ENST00000557588 USP9XQ93008 2570 aaPredicted RBP18.49■□□□□ 0.55
ABCD4-228ENST00000557588 TSPAN11A1L157 253 aa18.49■□□□□ 0.55
ABCD4-228ENST00000557588 ZSCAN5CA6NGD5 496 aaPredicted RBP18.49■□□□□ 0.55
ABCD4-228ENST00000557588 AGRPO00253 132 aa18.49■□□□□ 0.55
ABCD4-228ENST00000557588 IGSF6O95976 241 aa18.49■□□□□ 0.55
ABCD4-228ENST00000557588 TNFP01375 233 aa18.49■□□□□ 0.55
ABCD4-228ENST00000557588 PNMA6AP0CW24 399 aaPredicted RBP18.49■□□□□ 0.55
ABCD4-228ENST00000557588 PON1P27169 355 aa18.49■□□□□ 0.55
ABCD4-228ENST00000557588 ATP1A2P50993 1020 aa18.49■□□□□ 0.55
ABCD4-228ENST00000557588 RAD51Q06609 339 aa18.49■□□□□ 0.55
ABCD4-228ENST00000557588 MTM1Q13496 603 aa18.49■□□□□ 0.55
ABCD4-228ENST00000557588 EXOC3L4Q17RC7 722 aa18.49■□□□□ 0.55
ABCD4-228ENST00000557588 MAP9Q49MG5 647 aa18.49■□□□□ 0.55
ABCD4-228ENST00000557588 LEKR1Q6ZMV7 388 aa18.49■□□□□ 0.55
ABCD4-228ENST00000557588 PTRH1Q86Y79 214 aaKnown RBP18.49■□□□□ 0.55
ABCD4-228ENST00000557588 CASKIN2Q8WXE0 1202 aa18.49■□□□□ 0.55
ABCD4-228ENST00000557588 SEMA6CQ9H3T2 930 aa18.49■□□□□ 0.55
ABCD4-228ENST00000557588 SIX2Q9NPC8 291 aa18.49■□□□□ 0.55
ABCD4-228ENST00000557588 LRIT1Q9P2V4 623 aa18.49■□□□□ 0.55
ABCD4-228ENST00000557588 OR12D3Q9UGF7 316 aa18.49■□□□□ 0.55
ABCD4-228ENST00000557588 ZFC3H1O60293 1989 aaKnown RBP18.48■□□□□ 0.55
ABCD4-228ENST00000557588 GOLGA6L4A6NEF3 574 aa18.48■□□□□ 0.55
ABCD4-228ENST00000557588 FOXN3O00409 490 aaPredicted RBP18.48■□□□□ 0.55
ABCD4-228ENST00000557588 KDELR3O43731 214 aa18.48■□□□□ 0.55
ABCD4-228ENST00000557588 FGFR1OPO95684 399 aaKnown RBP18.48■□□□□ 0.55
ABCD4-228ENST00000557588 CASRP41180 1078 aa18.48■□□□□ 0.55
ABCD4-228ENST00000557588 KIAA1024LP59773 190 aa18.48■□□□□ 0.55
ABCD4-228ENST00000557588 SKIDA1Q1XH10 827 aa18.48■□□□□ 0.55
ABCD4-228ENST00000557588 EFHC2Q5JST6 749 aa18.48■□□□□ 0.55
ABCD4-228ENST00000557588 RWDD4Q6NW29 188 aaKnown RBP18.48■□□□□ 0.55
ABCD4-228ENST00000557588 SFTPA2Q8IWL1 248 aa18.48■□□□□ 0.55
ABCD4-228ENST00000557588 FAM71AQ8IYT1 594 aa18.48■□□□□ 0.55
ABCD4-228ENST00000557588 FAM46DQ8NEK8 389 aa18.48■□□□□ 0.55
ABCD4-228ENST00000557588 OR1E3Q8WZA6 343 aa18.48■□□□□ 0.55
ABCD4-228ENST00000557588 NKD1Q969G9 470 aa18.48■□□□□ 0.55
ABCD4-228ENST00000557588 FGF22Q9HCT0 170 aa18.48■□□□□ 0.55
ABCD4-228ENST00000557588 AKAP7Q9P0M2 348 aaPredicted RBP18.48■□□□□ 0.55
ABCD4-228ENST00000557588 ANAPC2Q9UJX6 822 aa18.48■□□□□ 0.55
ABCD4-228ENST00000557588 PCDHGA3Q9Y5H0 932 aa18.48■□□□□ 0.55
ABCD4-228ENST00000557588 MYO9AB2RTY4 2548 aa18.48■□□□□ 0.55
ABCD4-228ENST00000557588 B4DGG1 531 aa18.47■□□□□ 0.55
ABCD4-228ENST00000557588 HGSO14964 777 aaPredicted RBP18.47■□□□□ 0.55
ABCD4-228ENST00000557588 CPNE6O95741 557 aa18.47■□□□□ 0.55
ABCD4-228ENST00000557588 PCCBP05166 539 aa18.47■□□□□ 0.55
ABCD4-228ENST00000557588 XPAP23025 273 aaPredicted RBP18.47■□□□□ 0.55
ABCD4-228ENST00000557588 ARSDP51689 593 aa18.47■□□□□ 0.55
ABCD4-228ENST00000557588 RHOAP61586 193 aa18.47■□□□□ 0.55
ABCD4-228ENST00000557588 B4GALNT1Q00973 533 aa18.47■□□□□ 0.55
ABCD4-228ENST00000557588 ARHGEF7Q14155 803 aa18.47■□□□□ 0.55
ABCD4-228ENST00000557588 CLPPQ16740 277 aaPredicted RBP18.47■□□□□ 0.55
ABCD4-228ENST00000557588 INO80DQ53TQ3 878 aaPredicted RBP18.47■□□□□ 0.55
ABCD4-228ENST00000557588 SPECC1LQ69YQ0 1117 aa18.47■□□□□ 0.55
ABCD4-228ENST00000557588 ZNF438Q7Z4V0 828 aa18.47■□□□□ 0.55
ABCD4-228ENST00000557588 TAF8Q7Z7C8 310 aa18.47■□□□□ 0.55
ABCD4-228ENST00000557588 IRF2BP1Q8IU81 584 aa18.47■□□□□ 0.55
ABCD4-228ENST00000557588 OR56A4Q8NGH8 313 aa18.47■□□□□ 0.55
ABCD4-228ENST00000557588 HCAR2Q8TDS4 363 aa18.47■□□□□ 0.55
ABCD4-228ENST00000557588 GPBAR1Q8TDU6 330 aa18.47■□□□□ 0.55
ABCD4-228ENST00000557588 PCDH12Q9NPG4 1184 aa18.47■□□□□ 0.55
ABCD4-228ENST00000557588 DNAJC12Q9UKB3 198 aa18.47■□□□□ 0.55
ABCD4-228ENST00000557588 FAM72CH0Y354 149 aa18.46■□□□□ 0.55
ABCD4-228ENST00000557588 GOLGA8SH3BPF8 625 aa18.46■□□□□ 0.55
ABCD4-228ENST00000557588 BUB1O43683 1085 aa18.46■□□□□ 0.55
ABCD4-228ENST00000557588 LRIG2O94898 1065 aa18.46■□□□□ 0.55
ABCD4-228ENST00000557588 LSM8O95777 96 aaKnown RBP18.46■□□□□ 0.55
ABCD4-228ENST00000557588 CCL4P13236 92 aa18.46■□□□□ 0.55
ABCD4-228ENST00000557588 ADRA1BP35368 520 aa18.46■□□□□ 0.55
ABCD4-228ENST00000557588 MMP12P39900 470 aa18.46■□□□□ 0.55
ABCD4-228ENST00000557588 BPIFB4P59827 614 aa18.46■□□□□ 0.55
ABCD4-228ENST00000557588 SERINC3Q13530 473 aa18.46■□□□□ 0.55
ABCD4-228ENST00000557588 NR1D2Q14995 579 aa18.46■□□□□ 0.55
ABCD4-228ENST00000557588 UGP2Q16851 508 aa18.46■□□□□ 0.55
ABCD4-228ENST00000557588 C2CD6Q53TS8 623 aa18.46■□□□□ 0.55
ABCD4-228ENST00000557588 FAM72AQ5TYM5 149 aa18.46■□□□□ 0.55
ABCD4-228ENST00000557588 FAM72DQ6L9T8 149 aa18.46■□□□□ 0.55
ABCD4-228ENST00000557588 PIM3Q86V86 326 aa18.46■□□□□ 0.55
ABCD4-228ENST00000557588 FAM72BQ86X60 149 aa18.46■□□□□ 0.55
ABCD4-228ENST00000557588 JPH3Q8WXH2 748 aaPredicted RBP18.46■□□□□ 0.55
ABCD4-228ENST00000557588 PMEPA1Q969W9 287 aa18.46■□□□□ 0.55
ABCD4-228ENST00000557588 TBC1D31Q96DN5 1066 aa18.46■□□□□ 0.55
ABCD4-228ENST00000557588 HMCESQ96FZ2 354 aa18.46■□□□□ 0.55
ABCD4-228ENST00000557588 RDH14Q9HBH5 336 aa18.46■□□□□ 0.55
ABCD4-228ENST00000557588 MAN2B2Q9Y2E5 1009 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms