RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 J3QKU1 62 aa8.8□□□□□ -1
VRK1-206ENST00000557222 FOXN3O00409 490 aaPredicted RBP8.8□□□□□ -1
VRK1-206ENST00000557222 AQP9O43315 295 aa8.8□□□□□ -1
VRK1-206ENST00000557222 ENDOD1O94919 500 aa8.8□□□□□ -1
VRK1-206ENST00000557222 LSM8O95777 96 aaKnown RBP8.8□□□□□ -1
VRK1-206ENST00000557222 PAK4O96013 591 aaPredicted RBP8.8□□□□□ -1
VRK1-206ENST00000557222 MPOP05164 745 aa8.8□□□□□ -1
VRK1-206ENST00000557222 RBMS1P29558 406 aaKnown RBP8.8□□□□□ -1
VRK1-206ENST00000557222 NUMBP49757 651 aa8.8□□□□□ -1
VRK1-206ENST00000557222 SULT1E1P49888 294 aa8.8□□□□□ -1
VRK1-206ENST00000557222 PFN3P60673 137 aa8.8□□□□□ -1
VRK1-206ENST00000557222 YPEL5P62699 121 aa8.8□□□□□ -1
VRK1-206ENST00000557222 RAC1P63000 192 aa8.8□□□□□ -1
VRK1-206ENST00000557222 GNA12Q03113 381 aa8.8□□□□□ -1
VRK1-206ENST00000557222 FGL2Q14314 439 aa8.8□□□□□ -1
VRK1-206ENST00000557222 BECN1Q14457 450 aa8.8□□□□□ -1
VRK1-206ENST00000557222 NR0B2Q15466 257 aa8.8□□□□□ -1
VRK1-206ENST00000557222 TAF1BQ53T94 588 aaPredicted RBP8.8□□□□□ -1
VRK1-206ENST00000557222 SLC47A2Q86VL8 602 aa8.8□□□□□ -1
VRK1-206ENST00000557222 PASD1Q8IV76 773 aa8.8□□□□□ -1
VRK1-206ENST00000557222 SDR16C5Q8N3Y7 309 aa8.8□□□□□ -1
VRK1-206ENST00000557222 MSANTD4Q8NCY6 345 aa8.8□□□□□ -1
VRK1-206ENST00000557222 GRIN3AQ8TCU5 1115 aa8.8□□□□□ -1
VRK1-206ENST00000557222 TTC9Q92623 222 aa8.8□□□□□ -1
VRK1-206ENST00000557222 NAT6Q93015 286 aa8.8□□□□□ -1
VRK1-206ENST00000557222 VCPIP1Q96JH7 1222 aa8.8□□□□□ -1
VRK1-206ENST00000557222 TBCBQ99426 244 aa8.8□□□□□ -1
VRK1-206ENST00000557222 KLF6Q99612 283 aaPredicted RBP8.8□□□□□ -1
VRK1-206ENST00000557222 IL12RB2Q99665 862 aa8.8□□□□□ -1
VRK1-206ENST00000557222 MYOCQ99972 504 aa8.8□□□□□ -1
VRK1-206ENST00000557222 BOCQ9BWV1 1114 aa8.8□□□□□ -1
VRK1-206ENST00000557222 OSBPL1AQ9BXW6 950 aa8.8□□□□□ -1
VRK1-206ENST00000557222 ZYG11BQ9C0D3 744 aa8.8□□□□□ -1
VRK1-206ENST00000557222 TNKS2Q9H2K2 1166 aa8.8□□□□□ -1
VRK1-206ENST00000557222 ATP13A1Q9HD20 1204 aa8.8□□□□□ -1
VRK1-206ENST00000557222 FZD3Q9NPG1 666 aa8.8□□□□□ -1
VRK1-206ENST00000557222 ANLNQ9NQW6 1124 aa8.8□□□□□ -1
VRK1-206ENST00000557222 MPP6Q9NZW5 540 aa8.8□□□□□ -1
VRK1-206ENST00000557222 SPASTQ9UBP0 616 aa8.8□□□□□ -1
VRK1-206ENST00000557222 DNAJC12Q9UKB3 198 aa8.8□□□□□ -1
VRK1-206ENST00000557222 ZSCAN5CA6NGD5 496 aaPredicted RBP8.79□□□□□ -1
VRK1-206ENST00000557222 C16orf96A6NNT2 1141 aa8.79□□□□□ -1
VRK1-206ENST00000557222 CDRT15L2A8MXV6 281 aa8.79□□□□□ -1
VRK1-206ENST00000557222 LMO7DNF2Z398 122 aa8.79□□□□□ -1
VRK1-206ENST00000557222 K7ENP7 123 aa8.79□□□□□ -1
VRK1-206ENST00000557222 RNF103O00237 685 aa8.79□□□□□ -1
VRK1-206ENST00000557222 BIN1O00499 593 aa8.79□□□□□ -1
VRK1-206ENST00000557222 KLK10O43240 276 aa8.79□□□□□ -1
VRK1-206ENST00000557222 POP4O95707 220 aaKnown RBP8.79□□□□□ -1
VRK1-206ENST00000557222 GSRP00390 522 aa8.79□□□□□ -1
VRK1-206ENST00000557222 TGM2P21980 687 aa8.79□□□□□ -1
VRK1-206ENST00000557222 MAPKAPK2P49137 400 aa8.79□□□□□ -1
VRK1-206ENST00000557222 SUOXP51687 545 aa8.79□□□□□ -1
VRK1-206ENST00000557222 CCNHP51946 323 aaPredicted RBP8.79□□□□□ -1
VRK1-206ENST00000557222 RNASE9P60153 205 aaKnown RBP8.79□□□□□ -1
VRK1-206ENST00000557222 ARF5P84085 180 aa8.79□□□□□ -1
VRK1-206ENST00000557222 PDE1CQ14123 709 aaPredicted RBP8.79□□□□□ -1
VRK1-206ENST00000557222 POLD3Q15054 466 aaPredicted RBP8.79□□□□□ -1
VRK1-206ENST00000557222 ZNF805Q5CZA5 627 aa8.79□□□□□ -1
VRK1-206ENST00000557222 INO80CQ6PI98 192 aaPredicted RBP8.79□□□□□ -1
VRK1-206ENST00000557222 LVRNQ6Q4G3 990 aa8.79□□□□□ -1
VRK1-206ENST00000557222 LINGO4Q6UY18 593 aa8.79□□□□□ -1
VRK1-206ENST00000557222 RBM44Q6ZP01 1051 aaKnown RBP8.79□□□□□ -1
VRK1-206ENST00000557222 PARS2Q7L3T8 475 aaKnown RBP8.79□□□□□ -1
VRK1-206ENST00000557222 TFAP2DQ7Z6R9 452 aa8.79□□□□□ -1
VRK1-206ENST00000557222 CLEC14AQ86T13 490 aa8.79□□□□□ -1
VRK1-206ENST00000557222 XYLT1Q86Y38 959 aa8.79□□□□□ -1
VRK1-206ENST00000557222 IRF2BP1Q8IU81 584 aa8.79□□□□□ -1
VRK1-206ENST00000557222 ARL14Q8N4G2 192 aa8.79□□□□□ -1
VRK1-206ENST00000557222 OR7D4Q8NG98 312 aa8.79□□□□□ -1
VRK1-206ENST00000557222 WDR36Q8NI36 951 aaKnown RBP8.79□□□□□ -1
VRK1-206ENST00000557222 CASKIN2Q8WXE0 1202 aa8.79□□□□□ -1
VRK1-206ENST00000557222 CENPTQ96BT3 561 aa8.79□□□□□ -1
VRK1-206ENST00000557222 SPON2Q9BUD6 331 aa8.79□□□□□ -1
VRK1-206ENST00000557222 C1QTNF7Q9BXJ2 289 aa8.79□□□□□ -1
VRK1-206ENST00000557222 OSBPL2Q9H1P3 480 aa8.79□□□□□ -1
VRK1-206ENST00000557222 MAGEH1Q9H213 219 aa8.79□□□□□ -1
VRK1-206ENST00000557222 PDCL3Q9H2J4 239 aa8.79□□□□□ -1
VRK1-206ENST00000557222 SIX2Q9NPC8 291 aa8.79□□□□□ -1
VRK1-206ENST00000557222 HECAQ9UBI9 543 aaPredicted RBP8.79□□□□□ -1
VRK1-206ENST00000557222 SEPT3Q9UH03 358 aa8.79□□□□□ -1
VRK1-206ENST00000557222 TMEM59LQ9UK28 342 aa8.79□□□□□ -1
VRK1-206ENST00000557222 BOD1L1Q8NFC6 3051 aa8.78□□□□□ -1
VRK1-206ENST00000557222 HECTD1Q9ULT8 2610 aa8.78□□□□□ -1
VRK1-206ENST00000557222 CPED1A4D0V7 1026 aa8.78□□□□□ -1
VRK1-206ENST00000557222 IGLON5A6NGN9 336 aa8.78□□□□□ -1
VRK1-206ENST00000557222 TMEM110-MUSTN1A8MSY1 372 aa8.78□□□□□ -1
VRK1-206ENST00000557222 B8ZZF3 427 aa8.78□□□□□ -1
VRK1-206ENST00000557222 C9orf172C9J069 976 aa8.78□□□□□ -1
VRK1-206ENST00000557222 J3QW42 95 aa8.78□□□□□ -1
VRK1-206ENST00000557222 AREL1O15033 823 aa8.78□□□□□ -1
VRK1-206ENST00000557222 RAD51BO15315 384 aa8.78□□□□□ -1
VRK1-206ENST00000557222 SRGAP2O75044 1071 aa8.78□□□□□ -1
VRK1-206ENST00000557222 NEBLO76041 1014 aa8.78□□□□□ -1
VRK1-206ENST00000557222 CD160O95971 181 aa8.78□□□□□ -1
VRK1-206ENST00000557222 C6P13671 934 aa8.78□□□□□ -1
VRK1-206ENST00000557222 CYP11B1P15538 503 aa8.78□□□□□ -1
VRK1-206ENST00000557222 TFE3P19532 575 aaPredicted RBP8.78□□□□□ -1
VRK1-206ENST00000557222 MTIF2P46199 727 aaKnown RBP8.78□□□□□ -1
VRK1-206ENST00000557222 PEX5P50542 639 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms