RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 PBXIP1Q96AQ6 731 aa11.46□□□□□ -0.57
SRP54-213ENST00000556994 RPL10LQ96L21 214 aaKnown RBP11.46□□□□□ -0.57
SRP54-213ENST00000556994 RANBP9Q96S59 729 aa11.46□□□□□ -0.57
SRP54-213ENST00000556994 BRD8Q9H0E9 1235 aa11.46□□□□□ -0.57
SRP54-213ENST00000556994 SARDHQ9UL12 918 aa11.46□□□□□ -0.57
SRP54-213ENST00000556994 CDC14AQ9UNH5 594 aa11.46□□□□□ -0.57
SRP54-213ENST00000556994 FAF1Q9UNN5 650 aaPredicted RBP11.46□□□□□ -0.57
SRP54-213ENST00000556994 TCAF1Q9Y4C2 921 aa11.46□□□□□ -0.57
SRP54-213ENST00000556994 TRAF6Q9Y4K3 522 aa11.46□□□□□ -0.57
SRP54-213ENST00000556994 PTGDR2Q9Y5Y4 395 aa11.46□□□□□ -0.57
SRP54-213ENST00000556994 H0YJX3 145 aa11.46□□□□□ -0.58
SRP54-213ENST00000556994 CCL22O00626 93 aa11.46□□□□□ -0.58
SRP54-213ENST00000556994 ALDOCP09972 364 aaKnown RBP11.46□□□□□ -0.58
SRP54-213ENST00000556994 PNPLA4P41247 253 aa11.46□□□□□ -0.58
SRP54-213ENST00000556994 CDH13P55290 713 aa11.46□□□□□ -0.58
SRP54-213ENST00000556994 DNAJB13P59910 316 aa11.46□□□□□ -0.58
SRP54-213ENST00000556994 MAPRE2Q15555 327 aa11.46□□□□□ -0.58
SRP54-213ENST00000556994 MAP7D1Q3KQU3 841 aa11.46□□□□□ -0.58
SRP54-213ENST00000556994 LIMS2Q7Z4I7 341 aa11.46□□□□□ -0.58
SRP54-213ENST00000556994 C2CD4AQ8NCU7 369 aaPredicted RBP11.46□□□□□ -0.58
SRP54-213ENST00000556994 TFAP2CQ92754 450 aa11.46□□□□□ -0.58
SRP54-213ENST00000556994 EXT2Q93063 718 aa11.46□□□□□ -0.58
SRP54-213ENST00000556994 PCED1BQ96HM7 432 aa11.46□□□□□ -0.58
SRP54-213ENST00000556994 ANKRD60Q9BZ19 345 aa11.46□□□□□ -0.58
SRP54-213ENST00000556994 MRPL40Q9NQ50 206 aaKnown RBP11.46□□□□□ -0.58
SRP54-213ENST00000556994 NDFIP2Q9NV92 336 aa11.46□□□□□ -0.58
SRP54-213ENST00000556994 SMOXQ9NWM0 555 aa11.46□□□□□ -0.58
SRP54-213ENST00000556994 ARHGEF38Q9NXL2 777 aa11.46□□□□□ -0.58
SRP54-213ENST00000556994 IPO11Q9UI26 975 aaKnown RBP11.46□□□□□ -0.58
SRP54-213ENST00000556994 AAR2Q9Y312 384 aaKnown RBP11.46□□□□□ -0.58
SRP54-213ENST00000556994 PPP2R3BQ9Y5P8 575 aa11.46□□□□□ -0.58
SRP54-213ENST00000556994 GMEB1Q9Y692 573 aa11.46□□□□□ -0.58
SRP54-213ENST00000556994 SCN4AP35499 1836 aa11.46□□□□□ -0.58
SRP54-213ENST00000556994 A0A087X1B8 175 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 PPP6CO00743 305 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 SUPT7LO94864 414 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 HNRNPCP07910 306 aaKnown RBP eCLIP11.45□□□□□ -0.585e-7■■■□□ 16.2
SRP54-213ENST00000556994 DARSP14868 501 aaKnown RBP11.45□□□□□ -0.58
SRP54-213ENST00000556994 PFKPQ01813 784 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 CAPRIN1Q14444 709 aaKnown RBP11.45□□□□□ -0.58
SRP54-213ENST00000556994 C16orf72Q14CZ0 275 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 KIF19Q2TAC6 998 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 VPS26BQ4G0F5 336 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 INTS6LQ5JSJ4 861 aaKnown RBP11.45□□□□□ -0.58
SRP54-213ENST00000556994 SAMD4BQ5PRF9 694 aaKnown RBP11.45□□□□□ -0.58
SRP54-213ENST00000556994 TBCELQ5QJ74 424 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 PPP4R4Q6NUP7 873 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 NEPROQ6NW34 567 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 TTC33Q6PID6 262 aaPredicted RBP11.45□□□□□ -0.58
SRP54-213ENST00000556994 TRIM74Q86UV6 250 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 TRIM73Q86UV7 250 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 SHCBP1Q8NEM2 672 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 DNAJB3Q8WWF6 145 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 STON2Q8WXE9 905 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 IRGQQ8WZA9 623 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 TOP1MTQ969P6 601 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 EFHD1Q9BUP0 239 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 SLC25A23Q9BV35 468 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 FSD1LQ9BXM9 530 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 MROH8Q9H579 483 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 ALG9Q9H6U8 611 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 EML4Q9HC35 981 aaKnown RBP11.45□□□□□ -0.58
SRP54-213ENST00000556994 GLOD4Q9HC38 313 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 SLC8A2Q9UPR5 921 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 RALGAPA2Q2PPJ7 1873 aa11.45□□□□□ -0.58
SRP54-213ENST00000556994 MEIS3P2A8K0S8 358 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 NR5A2O00482 541 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 DLGAP1O14490 977 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 SMPD1P17405 629 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 CHRM3P20309 590 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 AIF1P55008 147 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 ANKDD1AQ495B1 522 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 GPR141Q7Z602 305 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 TAC4Q86UU9 113 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 FAM35AQ86V20 835 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 ATPAF2Q8N5M1 289 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 OR2T34Q8NGX1 318 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 OR2T3Q8NH03 318 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 C12orf43Q96C57 262 aaKnown RBP11.44□□□□□ -0.58
SRP54-213ENST00000556994 ISOC1Q96CN7 298 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 UHRF1Q96T88 793 aaPredicted RBP11.44□□□□□ -0.58
SRP54-213ENST00000556994 TCF12Q99081 682 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 MUC3BQ9H195 1237 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 UPF3AQ9H1J1 476 aaKnown RBP11.44□□□□□ -0.58
SRP54-213ENST00000556994 AP3B1O00203 1094 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 NME4O00746 187 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 STAMBPO95630 424 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 HLA-DQB2P05538 268 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 MMP3P08254 477 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 TFPTP0C1Z6 253 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 CXCR3P49682 368 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 POU4F1Q01851 419 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 GPR158Q5T848 1215 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 AGAP9Q5VTM2 703 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 FAM45BPQ6NSW5 357 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 TMEM207Q6UWW9 146 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 LARP4Q71RC2 724 aaKnown RBP eCLIP11.44□□□□□ -0.58
SRP54-213ENST00000556994 ERMP1Q7Z2K6 904 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 EPHX4Q8IUS5 362 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 RYBPQ8N488 228 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms