RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 ELF4Q99607 663 aaPredicted RBP14.21□□□□□ -0.13
SLIRP-207ENST00000556831 MGME1Q9BQP7 344 aa14.21□□□□□ -0.13
SLIRP-207ENST00000556831 WRAP53Q9BUR4 548 aaKnown RBP14.21□□□□□ -0.13
SLIRP-207ENST00000556831 PCDH12Q9NPG4 1184 aa14.21□□□□□ -0.13
SLIRP-207ENST00000556831 AMACRQ9UHK6 382 aa14.21□□□□□ -0.13
SLIRP-207ENST00000556831 ZMIZ1Q9ULJ6 1067 aa14.21□□□□□ -0.13
SLIRP-207ENST00000556831 TFR2Q9UP52 801 aa14.21□□□□□ -0.13
SLIRP-207ENST00000556831 ZFR2Q9UPR6 939 aaKnown RBP14.21□□□□□ -0.13
SLIRP-207ENST00000556831 CA5BQ9Y2D0 317 aa14.21□□□□□ -0.13
SLIRP-207ENST00000556831 FNDC3AQ9Y2H6 1198 aaKnown RBP14.21□□□□□ -0.13
SLIRP-207ENST00000556831 ATP8A1Q9Y2Q0 1164 aa14.21□□□□□ -0.13
SLIRP-207ENST00000556831 PCDHGB2Q9Y5G2 931 aa14.21□□□□□ -0.13
SLIRP-207ENST00000556831 A0A1W2PR77 199 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 TSPAN11A1L157 253 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 BTNL10A8MVZ5 291 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 H0Y8X5 98 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 LZTS3O60299 673 aaPredicted RBP14.2□□□□□ -0.14
SLIRP-207ENST00000556831 MMP20O60882 483 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 GJB3O75712 270 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 ZIC2O95409 532 aaPredicted RBP14.2□□□□□ -0.14
SLIRP-207ENST00000556831 PAK4O96013 591 aaPredicted RBP14.2□□□□□ -0.14
SLIRP-207ENST00000556831 CPP00450 1065 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 ELFN1P0C7U0 828 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 CCNB1P14635 433 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 TIMP2P16035 220 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 CES1P23141 567 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 PMLP29590 882 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 RABIFP47224 123 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 MAXP61244 160 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 AP1B1Q10567 949 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 ZNF423Q2M1K9 1284 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 HS1BP3Q53T59 392 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 TFDP3Q5H9I0 405 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 PRAMEF14Q5SWL7 426 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 KDM7AQ6ZMT4 941 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 DCP2Q8IU60 420 aaKnown RBP14.2□□□□□ -0.14
SLIRP-207ENST00000556831 KATNAL2Q8IYT4 538 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 RCOR2Q8IZ40 523 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 PQLC3Q8N755 202 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 KIAA1524Q8TCG1 905 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 CAMK1GQ96NX5 476 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 TSGA13Q96PP4 275 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 TSGA10Q9BZW7 698 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 BRD8Q9H0E9 1235 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 GOLPH3Q9H4A6 298 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 RBM22Q9NW64 420 aaKnown RBP eCLIP14.2□□□□□ -0.147e-6■■■□□ 17.4
SLIRP-207ENST00000556831 DTLQ9NZJ0 730 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 SEPT10Q9P0V9 454 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 GGT7Q9UJ14 662 aa14.2□□□□□ -0.14
SLIRP-207ENST00000556831 MACROD2A1Z1Q3 448 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 CCDC66A2RUB6 948 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 AREL1O15033 823 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 MUSKO15146 869 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 ITGAVP06756 1048 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 CD59P13987 128 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 GRK6P43250 576 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 NR2C2P49116 596 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 THOP1P52888 689 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 EPHB1P54762 984 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 IL9RQ01113 521 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 ARMC12Q5T9G4 340 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 SLC9A4Q6AI14 798 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 MFSD7Q6UXD7 560 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 KYAT3Q6YP21 454 aaKnown RBP14.19□□□□□ -0.14
SLIRP-207ENST00000556831 SPOCD1Q6ZMY3 1216 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 USP45Q70EL2 814 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.19□□□□□ -0.14
SLIRP-207ENST00000556831 PLD5Q8N7P1 536 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 TMEM145Q8NBT3 493 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 EXD1Q8NHP7 514 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 ASB12Q8WXK4 309 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 FATE1Q969F0 183 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 NSMCE3Q96MG7 304 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 SEMA3CQ99985 751 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 FERMT1Q9BQL6 677 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 DESI2Q9BSY9 194 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 C1QTNF2Q9BXJ5 285 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 ERVMER34-1Q9H9K5 563 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 LHX6Q9UPM6 363 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 HS3ST3A1Q9Y663 406 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 ANKRD36A6QL64 1941 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 TRPM6Q9BX84 2022 aa14.19□□□□□ -0.14
SLIRP-207ENST00000556831 A0A1B0GTQ1 180 aa14.18□□□□□ -0.14
SLIRP-207ENST00000556831 TMEM8BA6NDV4 472 aa14.18□□□□□ -0.14
SLIRP-207ENST00000556831 C3orf70A6NLC5 250 aaPredicted RBP14.18□□□□□ -0.14
SLIRP-207ENST00000556831 TAF4O00268 1085 aa14.18□□□□□ -0.14
SLIRP-207ENST00000556831 RIOK3O14730 519 aaKnown RBP14.18□□□□□ -0.14
SLIRP-207ENST00000556831 PJA2O43164 708 aa14.18□□□□□ -0.14
SLIRP-207ENST00000556831 SPINT1O43278 529 aa14.18□□□□□ -0.14
SLIRP-207ENST00000556831 SH3BP5O60239 455 aa14.18□□□□□ -0.14
SLIRP-207ENST00000556831 CST8O60676 142 aa14.18□□□□□ -0.14
SLIRP-207ENST00000556831 TOP3BO95985 862 aaKnown RBP14.18□□□□□ -0.14
SLIRP-207ENST00000556831 PEX11BO96011 259 aa14.18□□□□□ -0.14
SLIRP-207ENST00000556831 CYP2A6P11509 494 aaPredicted RBP14.18□□□□□ -0.14
SLIRP-207ENST00000556831 ITIH2P19823 946 aa14.18□□□□□ -0.14
SLIRP-207ENST00000556831 TGM2P21980 687 aa14.18□□□□□ -0.14
SLIRP-207ENST00000556831 CTNNA2P26232 953 aa14.18□□□□□ -0.14
SLIRP-207ENST00000556831 MMP12P39900 470 aa14.18□□□□□ -0.14
SLIRP-207ENST00000556831 CDKN2BP42772 138 aa14.18□□□□□ -0.14
SLIRP-207ENST00000556831 TNNT3P45378 269 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms