RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-222ENST00000556778 ATG4AQ8WYN0 398 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 DNASE2BQ8WZ79 361 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 FUBP1Q96AE4 644 aaKnown RBP8.89□□□□□ -0.99
PRKCH-222ENST00000556778 LRIG1Q96JA1 1093 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 MS4A14Q96JA4 679 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 LOXL4Q96JB6 756 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 SLC6A18Q96N87 628 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 NUDCD1Q96RS6 583 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 IL12RB2Q99665 862 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 PCDH12Q9NPG4 1184 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 DYRK4Q9NR20 520 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 UBP1Q9NZI7 540 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 GMEB2Q9UKD1 530 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 ATP8A1Q9Y2Q0 1164 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 PCDHB9Q9Y5E1 797 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 RAI2Q9Y5P3 530 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.89□□□□□ -0.99
PRKCH-222ENST00000556778 TSPAN11A1L157 253 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 LRRC72A6NJI9 287 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 H0Y8X5 98 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 H7C0C1 242 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 APOC4-APOC2K7ER74 178 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 AREL1O15033 823 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 SLC7A4O43246 635 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 AVPP01185 164 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 PRLP01236 227 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 APOC2P02655 101 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 ATP1A1P05023 1023 aaKnown RBP8.88□□□□□ -0.99
PRKCH-222ENST00000556778 CFIP05156 583 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 ALPIP09923 528 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 PTPN7P35236 360 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 CD86P42081 329 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 ATP5OP48047 213 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 EIF3EP60228 445 aaKnown RBP8.88□□□□□ -0.99
PRKCH-222ENST00000556778 FAM193AP78312 1265 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 BCL2L1Q07817 233 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 CCDC173Q0VFZ6 552 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 NOMO1Q15155 1222 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 ZNF284Q2VY69 593 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 TRIM61Q5EBN2 209 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 ZNF569Q5MCW4 686 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 SPDYCQ5MJ68 293 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 CCDC181Q5TID7 509 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 PEAR1Q5VY43 1037 aaPredicted RBP8.88□□□□□ -0.99
PRKCH-222ENST00000556778 TIGD7Q6NT04 549 aaPredicted RBP8.88□□□□□ -0.99
PRKCH-222ENST00000556778 RFLNAQ6ZTI6 216 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 ZNF567Q8N184 647 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 SLC35F6Q8N357 371 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 TAB3Q8N5C8 712 aaPredicted RBP8.88□□□□□ -0.99
PRKCH-222ENST00000556778 FOXJ1Q92949 421 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 FATE1Q969F0 183 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 ECHDC3Q96DC8 303 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 ZNF641Q96N77 438 aaPredicted RBP8.88□□□□□ -0.99
PRKCH-222ENST00000556778 RBM15Q96T37 977 aaKnown RBP eCLIP8.88□□□□□ -0.99
PRKCH-222ENST00000556778 GORASP1Q9BQQ3 440 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 OSBPL1AQ9BXW6 950 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 ATP13A3Q9H7F0 1226 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 IL21RQ9HBE5 538 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 USP29Q9HBJ7 922 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 TM9SF3Q9HD45 589 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 SMARCAL1Q9NZC9 954 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 CHKBQ9Y259 395 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 COQ6Q9Y2Z9 468 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 CACNA1HO95180 2353 aa8.88□□□□□ -0.99
PRKCH-222ENST00000556778 A0A1B0GVT2 93 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 A0A1W2PPC4 97 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 LNP1A1A4G5 178 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 NEMP1O14524 444 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 PPP1R12AO14974 1030 aaPredicted RBP8.87□□□□□ -0.99
PRKCH-222ENST00000556778 FANCGO15287 622 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 BCAT2O15382 392 aaPredicted RBP8.87□□□□□ -0.99
PRKCH-222ENST00000556778 ST8SIA5O15466 376 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 HTRA2O43464 458 aaPredicted RBP8.87□□□□□ -0.99
PRKCH-222ENST00000556778 LATO43561 262 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 NRDCO43847 1150 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 FZD6O60353 706 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 TJP3O95049 919 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 PGLSO95336 258 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 MT-CYBP00156 380 aaPredicted RBP8.87□□□□□ -0.99
PRKCH-222ENST00000556778 ZNF806P0C7X5 589 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 RBP3P10745 1247 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 NFKB1P19838 968 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 CD27P26842 260 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 SERPINA4P29622 427 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 HNF1BP35680 557 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 MAPK8P45983 427 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 CCR5P51681 352 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 GDF10P55107 478 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 AP1S1P61966 158 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 RAD51Q06609 339 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 RALGDSQ12967 914 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 OLIG2Q13516 323 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 SNX1Q13596 522 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 SIX1Q15475 284 aaPredicted RBP8.87□□□□□ -0.99
PRKCH-222ENST00000556778 CSRP2Q16527 193 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 KIF19Q2TAC6 998 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 TMEM259Q4ZIN3 620 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 TEX44Q53QW1 395 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 SLC45A4Q5BKX6 768 aa8.87□□□□□ -0.99
PRKCH-222ENST00000556778 C4orf48Q5BLP8 95 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms