RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 HAPLN3Q96S86 360 aa14.05□□□□□ -0.16
ACTN1-219ENST00000556432 NCAPGQ9BPX3 1015 aa14.05□□□□□ -0.16
ACTN1-219ENST00000556432 CRACR2AQ9BSW2 395 aa14.05□□□□□ -0.16
ACTN1-219ENST00000556432 SCAND2PQ9GZW5 306 aaPredicted RBP14.05□□□□□ -0.16
ACTN1-219ENST00000556432 SUDS3Q9H7L9 328 aaPredicted RBP14.05□□□□□ -0.16
ACTN1-219ENST00000556432 PLCB1Q9NQ66 1216 aa14.05□□□□□ -0.16
ACTN1-219ENST00000556432 ZNF212Q9UDV6 495 aa14.05□□□□□ -0.16
ACTN1-219ENST00000556432 DNAI1Q9UI46 699 aa14.05□□□□□ -0.16
ACTN1-219ENST00000556432 PCDHGC3Q9UN70 934 aa14.05□□□□□ -0.16
ACTN1-219ENST00000556432 GTF3C3Q9Y5Q9 886 aa14.05□□□□□ -0.16
ACTN1-219ENST00000556432 CHD5Q8TDI0 1954 aa14.05□□□□□ -0.16
ACTN1-219ENST00000556432 ICE1Q9Y2F5 2266 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 ENO4A6NNW6 628 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 BECN2A8MW95 431 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 CACNB4O00305 520 aaPredicted RBP14.04□□□□□ -0.16
ACTN1-219ENST00000556432 HGSO14964 777 aaPredicted RBP14.04□□□□□ -0.16
ACTN1-219ENST00000556432 ZW10O43264 779 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 BUB1O43683 1085 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 NUDT21O43809 227 aaKnown RBP14.04□□□□□ -0.16
ACTN1-219ENST00000556432 TMCC1O94876 653 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 IGSF6O95976 241 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 TIMP2P16035 220 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 UGT1A3P35503 534 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 PPM1FP49593 454 aaPredicted RBP14.04□□□□□ -0.16
ACTN1-219ENST00000556432 MAZP56270 477 aaKnown RBP14.04□□□□□ -0.16
ACTN1-219ENST00000556432 RHOAP61586 193 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 PTK2Q05397 1052 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 ELP6Q0PNE2 266 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 LACTB2Q53H82 288 aaPredicted RBP14.04□□□□□ -0.16
ACTN1-219ENST00000556432 CFAP58Q5T655 872 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 OGFOD3Q6PK18 319 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 IRF2BP1Q8IU81 584 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 ZDHHC17Q8IUH5 632 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 TRIM59Q8IWR1 403 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 NETO2Q8NC67 525 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 OR56A4Q8NGH8 313 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 KIAA1524Q8TCG1 905 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 PMEPA1Q969W9 287 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 KIAA1143Q96AT1 154 aaPredicted RBP14.04□□□□□ -0.16
ACTN1-219ENST00000556432 NUDT22Q9BRQ3 303 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 PDCL3Q9H2J4 239 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 GPN2Q9H9Y4 310 aaPredicted RBP14.04□□□□□ -0.16
ACTN1-219ENST00000556432 DGKBQ9Y6T7 804 aa14.04□□□□□ -0.16
ACTN1-219ENST00000556432 TEP1Q99973 2627 aaKnown RBP14.04□□□□□ -0.16
ACTN1-219ENST00000556432 RP1L1Q8IWN7 2480 aaPredicted RBP14.03□□□□□ -0.16
ACTN1-219ENST00000556432 RAD1O60671 282 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 RAMP2O60895 175 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 AGFG2O95081 481 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 FGF3P11487 239 aaPredicted RBP14.03□□□□□ -0.16
ACTN1-219ENST00000556432 B4GALNT1Q00973 533 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 MTM1Q13496 603 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 SEPT6Q14141 434 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 TMEM52BQ4KMG9 183 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 ERAP2Q6P179 960 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 FAM129CQ86XR2 697 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 NRSN1Q8IZ57 195 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 AGBL5Q8NDL9 886 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 NELFBQ8WX92 580 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 SNX21Q969T3 373 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 NT5C3BQ969T7 300 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 HMCESQ96FZ2 354 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 FAM81BQ96LP2 452 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 TMEM168Q9H0V1 697 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 CDH19Q9H159 772 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 CYP4F12Q9HCS2 524 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 FGF22Q9HCT0 170 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 MRPL40Q9NQ50 206 aaKnown RBP14.03□□□□□ -0.16
ACTN1-219ENST00000556432 TMEM51Q9NW97 253 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 SLC39A1Q9NY26 324 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 PPARGC1AQ9UBK2 798 aaKnown RBP14.03□□□□□ -0.16
ACTN1-219ENST00000556432 DKK3Q9UBP4 350 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 PLEKHB1Q9UF11 243 aaPredicted RBP14.03□□□□□ -0.16
ACTN1-219ENST00000556432 HOOK1Q9UJC3 728 aaKnown RBP14.03□□□□□ -0.16
ACTN1-219ENST00000556432 CTNND2Q9UQB3 1225 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 B3GALT1Q9Y5Z6 326 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 LRP4O75096 1905 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 DOCK4Q8N1I0 1966 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 LRRK1Q38SD2 2015 aa14.03□□□□□ -0.16
ACTN1-219ENST00000556432 IGHV5-10-1A0A0J9YXX1 117 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 CXorf51AA0A1B0GTR3 108 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 BICDL2A1A5D9 508 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 GOLGA8SH3BPF8 625 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 CAPN5O15484 640 aaPredicted RBP14.02□□□□□ -0.17
ACTN1-219ENST00000556432 NKX2-8O15522 239 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 MTSS1O43312 755 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 B4GAT1O43505 415 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 DUX1O43812 170 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 PIGNO95427 931 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 GNA14O95837 355 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 CD44P16070 742 aaKnown RBP14.02□□□□□ -0.17
ACTN1-219ENST00000556432 KELP23276 732 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 CSTF2P33240 577 aaKnown RBP eCLIP14.02□□□□□ -0.17
ACTN1-219ENST00000556432 MAPKAPK2P49137 400 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 LIG3P49916 1009 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 APBA1Q02410 837 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 DEFB109BQ30KR1 87 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 TTI2Q6NXR4 508 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 TRIM65Q6PJ69 517 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 FOXR2Q6PJQ5 311 aa14.02□□□□□ -0.17
ACTN1-219ENST00000556432 CREBRFQ8IUR6 639 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms