RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 RABEPKQ7Z6M1 372 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 HORMAD1Q86X24 394 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 RGL4Q8IZJ4 473 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 ZCCHC9Q8N567 271 aaKnown RBP9.74□□□□□ -0.85
SRP54-210ENST00000556380 ARRDC2Q8TBH0 407 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.74□□□□□ -0.85
SRP54-210ENST00000556380 ZNF830Q96NB3 372 aaPredicted RBP9.74□□□□□ -0.85
SRP54-210ENST00000556380 C1QTNF2Q9BXJ5 285 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 OSBPL8Q9BZF1 889 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 ATP13A3Q9H7F0 1226 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 TM9SF3Q9HD45 589 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 NT5MQ9NPB1 228 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 ATP13A2Q9NQ11 1180 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 RBM22Q9NW64 420 aaKnown RBP eCLIP9.74□□□□□ -0.85
SRP54-210ENST00000556380 SUSD2Q9UGT4 822 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 GGT7Q9UJ14 662 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 GUCA1BQ9UMX6 200 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 SLC6A14Q9UN76 642 aa9.74□□□□□ -0.85
SRP54-210ENST00000556380 PACSIN2Q9UNF0 486 aaPredicted RBP9.74□□□□□ -0.85
SRP54-210ENST00000556380 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.73□□□□□ -0.85
SRP54-210ENST00000556380 A0A1W2PR77 199 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 PRR5-ARHGAP8B1AHC4 643 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 CDX4O14627 284 aaPredicted RBP9.73□□□□□ -0.85
SRP54-210ENST00000556380 SIAH2O43255 324 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 TSPAN6O43657 245 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 NRDCO43847 1150 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 FZD6O60353 706 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 SOCS5O75159 536 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 WNT1P04628 370 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 HLA-DQB2P05538 268 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 MMP2P08253 660 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 GNSP15586 552 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 CES1P23141 567 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 NUDT1P36639 197 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 SH3BP2P78314 561 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 LMNB2Q03252 620 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 BCL2L1Q07817 233 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 WASHC5Q12768 1159 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 TRAF2Q12933 501 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 ZBTB17Q13105 803 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 ZNF211Q13398 564 aaPredicted RBP9.73□□□□□ -0.85
SRP54-210ENST00000556380 UGP2Q16851 508 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 TMEM52BQ4KMG9 183 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 FAM182AQ5T1J6 154 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 SEL1L3Q68CR1 1132 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 BRAT1Q6PJG6 821 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 B4GALNT4Q76KP1 1039 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 BZW1Q7L1Q6 419 aaKnown RBP9.73□□□□□ -0.85
SRP54-210ENST00000556380 TTC7BQ86TV6 843 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 PRPF39Q86UA1 669 aaKnown RBP9.73□□□□□ -0.85
SRP54-210ENST00000556380 CCDC50Q8IVM0 306 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 REXO1L1PQ8IX06 675 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 BBS5Q8N3I7 341 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 TMEM145Q8NBT3 493 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 CCNYQ8ND76 341 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 NSMCE1Q8WV22 266 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 ASB12Q8WXK4 309 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 ANP32BQ92688 251 aaKnown RBP9.73□□□□□ -0.85
SRP54-210ENST00000556380 TADA1Q96BN2 335 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 FEM1CQ96JP0 617 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 SLC6A18Q96N87 628 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 SEMA3CQ99985 751 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 MIR1-1HGQ9H1L0 117 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 PCDH12Q9NPG4 1184 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 FSCN3Q9NQT6 498 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 DMTF1Q9Y222 760 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 ITM2BQ9Y287 266 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 PCDHGC4Q9Y5F7 938 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 CEP192Q8TEP8 1941 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 DCHS1Q96JQ0 3298 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 NCOR2Q9Y618 2525 aa9.73□□□□□ -0.85
SRP54-210ENST00000556380 RALGAPA1Q6GYQ0 2036 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 IGLON5A6NGN9 336 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 UPK3BL1B0FP48 263 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 UPK3BL2E5RIL1 263 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 APOC4-APOC2K7ER74 178 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 TM4SF5O14894 197 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 PPP1R12AO14974 1030 aaPredicted RBP9.72□□□□□ -0.85
SRP54-210ENST00000556380 VILLO15195 856 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 PCDH8O95206 1070 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 PGLSO95336 258 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 PRLP01236 227 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 APOC2P02655 101 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 ENGP17813 658 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 PTPN3P26045 913 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 SERPINA4P29622 427 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 MAT2AP31153 395 aaKnown RBP9.72□□□□□ -0.85
SRP54-210ENST00000556380 CSNK1EP49674 416 aaKnown RBP9.72□□□□□ -0.85
SRP54-210ENST00000556380 AFF3P51826 1226 aaKnown RBP9.72□□□□□ -0.85
SRP54-210ENST00000556380 LIMK1P53667 647 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 RPS21P63220 83 aaKnown RBP9.72□□□□□ -0.85
SRP54-210ENST00000556380 RACK1P63244 317 aaKnown RBP9.72□□□□□ -0.85
SRP54-210ENST00000556380 ARHGAP8P85298 464 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 DSC2Q02487 901 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 AP1B1Q10567 949 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 KLF1Q13351 362 aaPredicted RBP9.72□□□□□ -0.85
SRP54-210ENST00000556380 XRCC4Q13426 336 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 NOMO1Q15155 1222 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 TEX44Q53QW1 395 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 LRRC73Q5JTD7 316 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms