RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 ELP6Q0PNE2 266 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 MESP2Q0VG99 397 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 CAMK2GQ13555 558 aaPredicted RBP9.27□□□□□ -0.93
ACTN1-218ENST00000556343 SEPT6Q14141 434 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 ARHGEF7Q14155 803 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 UBXN2BQ14CS0 331 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 TAF1AQ15573 450 aaPredicted RBP9.27□□□□□ -0.93
ACTN1-218ENST00000556343 QPCTQ16769 361 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 FAM153CQ494X1 144 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 SPANXN3Q5MJ09 141 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 BEND6Q5SZJ8 279 aaPredicted RBP9.27□□□□□ -0.93
ACTN1-218ENST00000556343 FAM182AQ5T1J6 154 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 EMC10Q5UCC4 262 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 ALS2CLQ60I27 953 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 ZNF776Q68DI1 518 aaPredicted RBP9.27□□□□□ -0.93
ACTN1-218ENST00000556343 NAIF1Q69YI7 327 aaPredicted RBP9.27□□□□□ -0.93
ACTN1-218ENST00000556343 PKN3Q6P5Z2 889 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 FBXL19Q6PCT2 694 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 C3orf62Q6ZUJ4 267 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 TTC7BQ86TV6 843 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 ANKMY2Q8IV38 441 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 CHST14Q8NCH0 376 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 OR2T3Q8NH03 318 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 PIP4K2CQ8TBX8 421 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 GRIN3AQ8TCU5 1115 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 BLOC1S5Q8TDH9 187 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 STYXQ8WUJ0 223 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 PIH1D2Q8WWB5 315 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 CDKL2Q92772 493 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 PEX13Q92968 403 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 RAB7BQ96AH8 199 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 SIGLEC10Q96LC7 697 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 TRIB3Q96RU7 358 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 KIFC1Q9BW19 673 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 OSBPL6Q9BZF3 934 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 GPR63Q9BZJ6 419 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 PPCSQ9HAB8 311 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 LMAN1LQ9HAT1 526 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 RAD18Q9NS91 495 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.27□□□□□ -0.93
ACTN1-218ENST00000556343 RIMKLBQ9ULI2 386 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 PPM1HQ9ULR3 514 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 SOX13Q9UN79 622 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 CHMP2BQ9UQN3 213 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 NCKAP1Q9Y2A7 1128 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 PKP3Q9Y446 797 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 TEX264Q9Y6I9 313 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 WASF2Q9Y6W5 498 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 REV3LO60673 3130 aa9.27□□□□□ -0.93
ACTN1-218ENST00000556343 A0A0J9YYE9 177 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 FAM170BA6NMN3 283 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 C16orf96A6NNT2 1141 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 UPK3BL1B0FP48 263 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 UPK3BL2E5RIL1 263 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 PFDN6O15212 129 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 STX7O15400 261 aaKnown RBP9.26□□□□□ -0.93
ACTN1-218ENST00000556343 RNF40O75150 1001 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 GJB3O75712 270 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 USP1O94782 785 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 TRBC1P01850 177 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 DNTTP04053 509 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 IVLP07476 585 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 ABHD2P08910 425 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 ATXN1LP0C7T5 689 aaKnown RBP9.26□□□□□ -0.93
ACTN1-218ENST00000556343 C5AR1P21730 350 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 LPOP22079 712 aaPredicted RBP9.26□□□□□ -0.93
ACTN1-218ENST00000556343 GKP32189 559 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 HADHAP40939 763 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 ABL2P42684 1182 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 WASP42768 502 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 MAGEA9P43362 315 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 EIF3BP55884 814 aaKnown RBP9.26□□□□□ -0.93
ACTN1-218ENST00000556343 FAM193AP78312 1265 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 ZBTB16Q05516 673 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 ILF2Q12905 390 aaKnown RBP9.26□□□□□ -0.93
ACTN1-218ENST00000556343 GPS2Q13227 327 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 CCINQ13939 588 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 FRG1Q14331 258 aaKnown RBP9.26□□□□□ -0.93
ACTN1-218ENST00000556343 GALNT3Q14435 633 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 STAT4Q14765 748 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 POU6F1Q14863 301 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 KYNUQ16719 465 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 UGP2Q16851 508 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 KLHL38Q2WGJ6 581 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 TTC31Q49AM3 519 aaPredicted RBP9.26□□□□□ -0.93
ACTN1-218ENST00000556343 TJAP1Q5JTD0 557 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 CERCAMQ5T4B2 595 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 ZDHHC20Q5W0Z9 365 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 DENND5AQ6IQ26 1287 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 ZNF449Q6P9G9 518 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 FBXO38Q6PIJ6 1188 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 CYS1Q717R9 158 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 ZNF534Q76KX8 674 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 ERN2Q76MJ5 926 aaKnown RBP9.26□□□□□ -0.93
ACTN1-218ENST00000556343 GLT6D1Q7Z4J2 308 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 MMAAQ8IVH4 418 aaKnown RBP9.26□□□□□ -0.93
ACTN1-218ENST00000556343 SIX5Q8N196 739 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 ZNF366Q8N895 744 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 IL17RCQ8NAC3 791 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 RPLP0P6Q8NHW5 317 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms