RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 POLR2FP61218 127 aaKnown RBP14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 RHOAP61586 193 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 RPL7AP62424 266 aaKnown RBP14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 OGDHQ02218 1023 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 RALGDSQ12967 914 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 INPP5AQ14642 412 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 NFATC4Q14934 902 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 LRRC14Q15048 493 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 UGP2Q16851 508 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 CLEC16AQ2KHT3 1053 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 LINC00303Q3SY05 128 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 SLFN11Q7Z7L1 901 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 PHF13Q86YI8 300 aaPredicted RBP14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 HID1Q8IV36 788 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 PELI3Q8N2H9 469 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 SDR16C5Q8N3Y7 309 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 FSTL5Q8N475 847 aaPredicted RBP14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 ARL14Q8N4G2 192 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 CXorf40AQ8TE69 158 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 CASKIN2Q8WXE0 1202 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 PDXPQ96GD0 296 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 RBM15Q96T37 977 aaKnown RBP eCLIP14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 NLRC4Q9NPP4 1024 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 SIRPGQ9P1W8 387 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 GULP1Q9UBP9 304 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 ATXN7L1Q9ULK2 861 aaPredicted RBP14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 FZD10Q9ULW2 581 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 OR1A2Q9Y585 309 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 PCDHGA7Q9Y5G6 932 aa14.48□□□□□ -0.09
CHMP4BP1-201ENST00000556017 TMEM202A6NGA9 273 aa14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 CAPN8A6NHC0 703 aa14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 SIGLEC16A6NMB1 481 aa14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 J3KR12 359 aa14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 GPD1P21695 349 aa14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 EPHB2P29323 1055 aa14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 CCKBRP32239 447 aa14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 YBEYP58557 167 aaPredicted RBP14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 KRT31Q15323 416 aa14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 ESRP1Q6NXG1 681 aaKnown RBP14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 OGFOD3Q6PK18 319 aa14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 ENPP7Q6UWV6 458 aa14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 CCDC81Q6ZN84 652 aa14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 CAMK1DQ8IU85 385 aa14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 C3orf20Q8ND61 904 aa14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 HCAR2Q8TDS4 363 aa14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 OR1E3Q8WZA6 343 aa14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 GLMNQ92990 594 aa14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 CCDC97Q96F63 343 aaPredicted RBP14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 CCNL2Q96S94 520 aaPredicted RBP14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 VPS16Q9H269 839 aa14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 SUV39H2Q9H5I1 410 aa14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 FAM207AQ9NSI2 230 aaPredicted RBP14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 ADAM22Q9P0K1 906 aa14.47□□□□□ -0.09
CHMP4BP1-201ENST00000556017 SPENQ96T58 3664 aaKnown RBP14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 PES1O00541 588 aaKnown RBP14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 RPLP0P05388 317 aaKnown RBP14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 WT1P19544 449 aaPredicted RBP14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 ETV5P41161 510 aa14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 LIG3P49916 1009 aa14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 SUOXP51687 545 aa14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 SRP54P61011 504 aaKnown RBP14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 ZFP36L1Q07352 338 aaKnown RBP14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 ELOCQ15369 112 aa14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 ZSCAN23Q3MJ62 389 aa14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 PARP15Q460N3 678 aa14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 TRIM72Q6ZMU5 477 aa14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 RAB11FIP2Q7L804 512 aa14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 ARFGAP1Q8N6T3 406 aa14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 CCL4L1Q8NHW4 92 aa14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 ECHDC3Q96DC8 303 aa14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 GFM1Q96RP9 751 aaKnown RBP14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 C1QTNF7Q9BXJ2 289 aa14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 FGF22Q9HCT0 170 aa14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 APPL1Q9UKG1 709 aa14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 GPR34Q9UPC5 381 aa14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 DAAM1Q9Y4D1 1078 aa14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 GTF3C3Q9Y5Q9 886 aa14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 DGKBQ9Y6T7 804 aa14.46□□□□□ -0.09
CHMP4BP1-201ENST00000556017 RELNP78509 3460 aa14.46□□□□□ -0.1
CHMP4BP1-201ENST00000556017 TMEM110-MUSTN1A8MSY1 372 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 PRAMEF11O60813 436 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 RASGRP1O95267 797 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 FUCA1P04066 466 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 ALPIP09923 528 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 ITGB6P18564 788 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 ITIH1P19827 911 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 BLKP51451 505 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 ZNF143P52747 638 aaPredicted RBP14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 RAD51Q06609 339 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 ELP6Q0PNE2 266 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 MTM1Q13496 603 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 CA9Q16790 459 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 CERCAMQ5T4B2 595 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 AFMIDQ63HM1 303 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 CYP4V2Q6ZWL3 525 aaPredicted RBP14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 RD3Q7Z3Z2 195 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 DNAAF5Q86Y56 855 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 ARHGAP12Q8IWW6 846 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 FBXO39Q8N4B4 442 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 TSEN2Q8NCE0 465 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms