RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 C9orf152Q5JTZ5 239 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 XP32Q5T750 250 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 HECTD2Q5U5R9 776 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 ACSM2BQ68CK6 577 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 PMS2CLQ68D20 193 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 KRT80Q6KB66 452 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 FBXO42Q6P3S6 717 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 AAGABQ6PD74 315 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 IL27RAQ6UWB1 636 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 CFAP77Q6ZQR2 320 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 UBE2Q1Q7Z7E8 422 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 TRIM74Q86UV6 250 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 TRIM73Q86UV7 250 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 LCA5Q86VQ0 697 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 VRK3Q8IV63 474 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 HACE1Q8IYU2 909 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 RNF168Q8IYW5 571 aaPredicted RBP3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 TTC30BQ8N4P2 665 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 ZCCHC9Q8N567 271 aaKnown RBP3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 TDRD5Q8NAT2 981 aaKnown RBP3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 RASSF8Q8NHQ8 419 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 GSDMBQ8TAX9 411 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 ZNF398Q8TD17 642 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 BCAS4Q8TDM0 211 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 ATOH1Q92858 354 aaPredicted RBP3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 CCDC47Q96A33 483 aaKnown RBP3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 VMP1Q96GC9 406 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 ZC3HAV1LQ96H79 300 aaKnown RBP3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 CLMNQ96JQ2 1002 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 RITA1Q96K30 269 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 C20orf173Q96LM9 149 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 UROC1Q96N76 676 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 POLR3CQ9BUI4 534 aaPredicted RBP3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 C1QTNF1Q9BXJ1 281 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 SEZ6LQ9BYH1 1024 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 HRH4Q9H3N8 390 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 OSGEPL1Q9H4B0 414 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 PLK3Q9H4B4 646 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 MMRN2Q9H8L6 949 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 WDR6Q9NNW5 1121 aaKnown RBP3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 BPIFA1Q9NP55 256 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 SETD4Q9NVD3 440 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 ARGLU1Q9NWB6 273 aaPredicted RBP3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 WSB2Q9NYS7 404 aaPredicted RBP3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 SLC17A6Q9P2U8 582 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 PADI1Q9ULC6 663 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 PPIEQ9UNP9 301 aaKnown RBP3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 TRPV2Q9Y5S1 764 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 SOS1Q07889 1333 aaPredicted RBP3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 TRBV5-7A0A0A0MS05 114 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 C17orf102A2RUQ5 167 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 DPPA5A6NC42 116 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 DDTLA6NHG4 134 aaPredicted RBP3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 LRRC72A6NJI9 287 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 HSPB2A8KAH6 182 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 KLRF2D3W0D1 207 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 SMIM22K7EJ46 135 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 MGST3O14880 152 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 KIF5CO60282 957 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 MITFO75030 526 aaPredicted RBP3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 WNT1P04628 370 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 TPM2P07951 284 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 ABCB1P08183 1280 aaPredicted RBP3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 MYBL1P10243 752 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 CYP2A6P11509 494 aaPredicted RBP3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 ACTN1P12814 892 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 IL7RP16871 459 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 BMP5P22003 454 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 SLC16A2P36021 539 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 MSH2P43246 934 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 TRPC1P48995 793 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 CLK1P49759 484 aaKnown RBP3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 ZNF41P51814 821 aaPredicted RBP3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 CACNA2D1P54289 1103 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 YPEL5P62699 121 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 MRPS5P82675 430 aaKnown RBP3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 HMGN5P82970 282 aaKnown RBP3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 HSF1Q00613 529 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 PMPCAQ10713 525 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 TFCP2Q12800 502 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 GRIK3Q13003 919 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 IFT88Q13099 833 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 PKP1Q13835 747 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 NAB2Q15742 525 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 HSPB2Q16082 182 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 USP41Q3LFD5 358 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 ALG10Q5BKT4 473 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 ALG10BQ5I7T1 473 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 C6orf141Q5SZD1 244 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 KRT79Q5XKE5 535 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 LRRC8EQ6NSJ5 796 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 LCTLQ6UWM7 567 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 SEPT14Q6ZU15 432 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 FAM47EQ6ZV65 393 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 TTLL10Q6ZVT0 673 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 OTUD6AQ7L8S5 288 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 PLPPR4Q7Z2D5 763 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 CCDC186Q7Z3E2 898 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 SERPINA11Q86U17 422 aa3.1□□□□□ -1.91
MTHFD1-212ENST00000555858 CHSY1Q86X52 802 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms