RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 TMEM259Q4ZIN3 620 aa9.74□□□□□ -0.85
ACTN1-215ENST00000555616 SETMARQ53H47 684 aaPredicted RBP9.74□□□□□ -0.85
ACTN1-215ENST00000555616 SLC45A4Q5BKX6 768 aa9.74□□□□□ -0.85
ACTN1-215ENST00000555616 AFMIDQ63HM1 303 aa9.74□□□□□ -0.85
ACTN1-215ENST00000555616 LEKR1Q6ZMV7 388 aa9.74□□□□□ -0.85
ACTN1-215ENST00000555616 PARS2Q7L3T8 475 aaKnown RBP9.74□□□□□ -0.85
ACTN1-215ENST00000555616 GLRX5Q86SX6 157 aa9.74□□□□□ -0.85
ACTN1-215ENST00000555616 PRPF39Q86UA1 669 aaKnown RBP9.74□□□□□ -0.85
ACTN1-215ENST00000555616 IQCHQ86VS3 1027 aa9.74□□□□□ -0.85
ACTN1-215ENST00000555616 HORMAD1Q86X24 394 aa9.74□□□□□ -0.85
ACTN1-215ENST00000555616 NPWQ8N729 165 aa9.74□□□□□ -0.85
ACTN1-215ENST00000555616 PRELID2Q8N945 189 aa9.74□□□□□ -0.85
ACTN1-215ENST00000555616 OR6K2Q8NGY2 324 aa9.74□□□□□ -0.85
ACTN1-215ENST00000555616 ACTL9Q8TC94 416 aa9.74□□□□□ -0.85
ACTN1-215ENST00000555616 C1orf54Q8WWF1 131 aa9.74□□□□□ -0.85
ACTN1-215ENST00000555616 MAGOHBQ96A72 148 aaKnown RBP9.74□□□□□ -0.85
ACTN1-215ENST00000555616 SKA1Q96BD8 255 aa9.74□□□□□ -0.85
ACTN1-215ENST00000555616 OSBPL1AQ9BXW6 950 aa9.74□□□□□ -0.85
ACTN1-215ENST00000555616 BRD8Q9H0E9 1235 aa9.74□□□□□ -0.85
ACTN1-215ENST00000555616 ZDHHC6Q9H6R6 413 aa9.74□□□□□ -0.85
ACTN1-215ENST00000555616 HECAQ9UBI9 543 aaPredicted RBP9.74□□□□□ -0.85
ACTN1-215ENST00000555616 LHX3Q9UBR4 397 aa9.74□□□□□ -0.85
ACTN1-215ENST00000555616 PCOLCE2Q9UKZ9 415 aa9.74□□□□□ -0.85
ACTN1-215ENST00000555616 PLXNA2O75051 1894 aa9.74□□□□□ -0.85
ACTN1-215ENST00000555616 ADAMTS9Q9P2N4 1935 aa9.74□□□□□ -0.85
ACTN1-215ENST00000555616 A0A1B0GTQ1 180 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 A0A1W2PQU0 124 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 HACD1B0YJ81 288 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 PRAMEF26H0Y7S4 382 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 H7C0C1 242 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 DYNC1I1O14576 645 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 YKT6O15498 198 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 SPINT1O43278 529 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 LIASO43766 372 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 MFSD11O43934 449 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 POP4O95707 220 aaKnown RBP9.73□□□□□ -0.85
ACTN1-215ENST00000555616 IGSF6O95976 241 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 GAS8O95995 478 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 PECAM1P16284 738 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-215ENST00000555616 MAT2AP31153 395 aaKnown RBP9.73□□□□□ -0.85
ACTN1-215ENST00000555616 GKP32189 559 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 ATP5OP48047 213 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 EIF3EP60228 445 aaKnown RBP9.73□□□□□ -0.85
ACTN1-215ENST00000555616 RHOAP61586 193 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 FAM193AP78312 1265 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 GBE1Q04446 702 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 C2orf54Q08AI8 447 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 XRCC4Q13426 336 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 NOMO1Q15155 1222 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 SIX1Q15475 284 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-215ENST00000555616 MYLK3Q32MK0 819 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 ZNF805Q5CZA5 627 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 ATXN7L2Q5T6C5 722 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-215ENST00000555616 KIAA1161Q6NSJ0 714 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 DRICH1Q6PGQ1 229 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-215ENST00000555616 ZNF354CQ86Y25 554 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 LRRC49Q8IUZ0 686 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 CDKL3Q8IVW4 592 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-215ENST00000555616 ARHGAP12Q8IWW6 846 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 KLHL7Q8IXQ5 586 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 RYBPQ8N488 228 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-215ENST00000555616 MFSD2AQ8NA29 543 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 GRK7Q8WTQ7 553 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 ATG4AQ8WYN0 398 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 RAB7BQ96AH8 199 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 CNTNAP3BQ96NU0 1288 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 CAMK1GQ96NX5 476 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 ELF4Q99607 663 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-215ENST00000555616 CNTNAP3Q9BZ76 1288 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 ERVMER34-1Q9H9K5 563 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 GDF3Q9NR23 364 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 ETNK2Q9NVF9 386 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 DTLQ9NZJ0 730 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 SAE1Q9UBE0 346 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-215ENST00000555616 UBA2Q9UBT2 640 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-215ENST00000555616 ZNF148Q9UQR1 794 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 R3HDM2Q9Y2K5 976 aaKnown RBP9.73□□□□□ -0.85
ACTN1-215ENST00000555616 MFHAS1Q9Y4C4 1052 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 FADS3Q9Y5Q0 445 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 USP24Q9UPU5 2620 aa9.73□□□□□ -0.85
ACTN1-215ENST00000555616 TPRP12270 2363 aaKnown RBP9.73□□□□□ -0.85
ACTN1-215ENST00000555616 ZFHX4Q86UP3 3567 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 CFAP69A5D8W1 941 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 ARHGAP42A6NI28 874 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 C16orf96A6NNT2 1141 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 EFCAB8A8MWE9 144 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 TLR4O00206 839 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 DFFAO00273 331 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 AREL1O15033 823 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 STK10O94804 968 aaKnown RBP9.72□□□□□ -0.85
ACTN1-215ENST00000555616 UGT2B4P06133 528 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 ITGAVP06756 1048 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 RBP3P10745 1247 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 EPHA8P29322 1005 aaPredicted RBP9.72□□□□□ -0.85
ACTN1-215ENST00000555616 COILP38432 576 aaPredicted RBP9.72□□□□□ -0.85
ACTN1-215ENST00000555616 ABL2P42684 1182 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 GRK6P43250 576 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 PAPOLAP51003 745 aaKnown RBP9.72□□□□□ -0.85
ACTN1-215ENST00000555616 RPS21P63220 83 aaKnown RBP9.72□□□□□ -0.85
ACTN1-215ENST00000555616 DR1Q01658 176 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms