RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 RALGPS2Q86X27 583 aaPredicted RBP17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 TEKT5Q96M29 485 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 ZNF696Q9H7X3 374 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 SPAG4Q9NPE6 437 aa17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 UTP6Q9NYH9 597 aaKnown RBP17.16■□□□□ 0.34
PPP4R3A-208ENST00000555462 ZNF646O15015 1829 aaPredicted RBP17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 SRP72O76094 671 aaKnown RBP17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 SNRPB2P08579 225 aaKnown RBP17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 GNA12Q03113 381 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 GPR141Q7Z602 305 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 SHCBP1Q8NEM2 672 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 OR10Q1Q8NGQ4 319 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 GPR78Q96P69 363 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 SMOQ99835 787 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 C16orf70Q9BSU1 422 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 F8W810 466 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 EI24O14681 340 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 NRP2O60462 931 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 HMBSP08397 361 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 DIO3P55073 304 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 APOFQ13790 326 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 NEPROQ6NW34 567 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 TRPC4APQ8TEL6 797 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 TUBGCP3Q96CW5 907 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 TBL1YQ9BQ87 522 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 PCDH12Q9NPG4 1184 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 SEMA4BQ9NPR2 832 aaPredicted RBP17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 TRAF6Q9Y4K3 522 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 DGKBQ9Y6T7 804 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 LCTP09848 1927 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 ATP5BP06576 529 aaKnown RBP17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 ALDOCP09972 364 aaKnown RBP17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 CYP2C9P11712 490 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 ZNF182P17025 639 aaPredicted RBP17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 PMS2P3Q13401 168 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 CYP51A1Q16850 503 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 ATPAF2Q8N5M1 289 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 ASB9Q96DX5 294 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 MTG1Q9BT17 334 aaPredicted RBP17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 EPS8L2Q9H6S3 715 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 NT5MQ9NPB1 228 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 NDUFA13Q9P0J0 144 aa17.15■□□□□ 0.34
PPP4R3A-208ENST00000555462 ZBTB11O95625 1053 aaPredicted RBP17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 ARSDP51689 593 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 IST1P53990 364 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 RHDQ02161 417 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 TRAF2Q12933 501 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 C6orf10Q5SRN2 563 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 ACBD5Q5T8D3 534 aaPredicted RBP17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 ANKRD34AQ69YU3 496 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 TAC4Q86UU9 113 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 BPIFB6Q8NFQ5 453 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 TMEM209Q96SK2 561 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 PRDM16Q9HAZ2 1276 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 MID1IP1Q9NPA3 183 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 DUS2Q9NX74 493 aaKnown RBP17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 MARCH4Q9P2E8 410 aaPredicted RBP17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 FAM50BQ9Y247 325 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 A0A0C4DFX4 3053 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 H3BNH8 94 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 NME4O00746 187 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 SETSIPP0DME0 302 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 PRDX6P30041 224 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 CD151P48509 253 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 BEX3Q00994 111 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 KCTD11Q693B1 232 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 NAPEPLDQ6IQ20 393 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 TMEM214Q6NUQ4 689 aaKnown RBP17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 PKN3Q6P5Z2 889 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 CIR1Q86X95 450 aaPredicted RBP17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 GAD1Q99259 594 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 ADAM28Q9UKQ2 775 aa17.14■□□□□ 0.33
PPP4R3A-208ENST00000555462 A0A0J9YYE9 177 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 TOR1BO14657 336 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 HLA-DQB2P05538 268 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 ELK4P28324 431 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 CLCN2P51788 898 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 CCNA1P78396 465 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 LRP8Q14114 963 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 ZNF484Q5JVG2 852 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 CYS1Q717R9 158 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 DPP9Q86TI2 863 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 FUNDC1Q8IVP5 155 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 TNIP3Q96KP6 325 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 AKTIPQ9H8T0 292 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 EIF2B3Q9NR50 452 aaKnown RBP17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 ACTL7AQ9Y615 435 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 UBA6A0AVT1 1052 aaPredicted RBP17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 UBXN8O00124 270 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 SNAP29O95721 258 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 OR4Q2P0C623 313 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 MAGEA12P43365 314 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 CDKN2DP55273 166 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 PAFAH1B3Q15102 231 aaKnown RBP17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 ZDHHC17Q8IUH5 632 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 ZMIZ2Q8NF64 920 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 HDAC10Q969S8 669 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 ISOC1Q96CN7 298 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 ACOX2Q99424 681 aa17.13■□□□□ 0.33
PPP4R3A-208ENST00000555462 SLC39A8Q9C0K1 460 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms