RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 ERI2A8K979 691 aaKnown RBP10.26□□□□□ -0.77
NEK9-205ENST00000555405 BHMG1C9JSJ3 638 aaPredicted RBP10.26□□□□□ -0.77
NEK9-205ENST00000555405 GPR39O43194 453 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 POP4O95707 220 aaKnown RBP10.26□□□□□ -0.77
NEK9-205ENST00000555405 PRSS56P0CW18 603 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 CTHP32929 405 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 NPY2RP49146 381 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 ZNF844Q08AG5 666 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 SF3A3Q12874 501 aaKnown RBP eCLIP10.26□□□□□ -0.77
NEK9-205ENST00000555405 CRYMQ14894 314 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 TMEM31Q5JXX7 168 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 DENND5AQ6IQ26 1287 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 NCEH1Q6PIU2 408 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 ETFBKMTQ8IXQ9 262 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 SRRM1Q8IYB3 904 aaKnown RBP10.26□□□□□ -0.77
NEK9-205ENST00000555405 IQCKQ8N0W5 287 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 OR2A12Q8NGT7 310 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.26□□□□□ -0.77
NEK9-205ENST00000555405 TTC25Q96NG3 672 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 WRAP53Q9BUR4 548 aaKnown RBP10.26□□□□□ -0.77
NEK9-205ENST00000555405 UNKQ9C0B0 810 aaKnown RBP10.26□□□□□ -0.77
NEK9-205ENST00000555405 EPB41L4BQ9H329 900 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 DYRK4Q9NR20 520 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 FAM8A1Q9UBU6 413 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 ANKRD66B4E2M5 251 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 OPA1O60313 960 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 CLDN7O95471 211 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 EGFP01133 1207 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 OAS2P29728 719 aaKnown RBP10.26□□□□□ -0.77
NEK9-205ENST00000555405 ZRANB3Q5FWF4 1079 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 PCID2Q5JVF3 399 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 TSPAN33Q86UF1 283 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 ZNF557Q8N988 423 aaPredicted RBP10.26□□□□□ -0.77
NEK9-205ENST00000555405 TXNDC5Q8NBS9 432 aaKnown RBP10.26□□□□□ -0.77
NEK9-205ENST00000555405 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.26□□□□□ -0.77
NEK9-205ENST00000555405 GDAP1Q8TB36 358 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 TDRD1Q9BXT4 1180 aaKnown RBP10.26□□□□□ -0.77
NEK9-205ENST00000555405 FOXP3Q9BZS1 431 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 IL22Q9GZX6 179 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 TRPV4Q9HBA0 871 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 OBP2AQ9NY56 170 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 MARK1Q9P0L2 795 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 ITM2BQ9Y287 266 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 OBSL1O75147 1896 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 H3BQF6 201 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 SMAPO00193 183 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 CA4P22748 312 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 GRIA2P42262 883 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 IRX4P78413 519 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 GAB4Q2WGN9 574 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 SDE2Q6IQ49 451 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 FBXL19Q6PCT2 694 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 LYSMD3Q7Z3D4 306 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 C4orf33Q8N1A6 199 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 ANKRD42Q8N9B4 389 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 KLK6Q92876 244 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 CYTH2Q99418 400 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 PAFAH2Q99487 392 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 RABEP2Q9H5N1 569 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 COL4A4P53420 1690 aaPredicted RBP10.25□□□□□ -0.77
NEK9-205ENST00000555405 TCF20Q9UGU0 1960 aaKnown RBP10.25□□□□□ -0.77
NEK9-205ENST00000555405 UBA6A0AVT1 1052 aaPredicted RBP10.25□□□□□ -0.77
NEK9-205ENST00000555405 AGPSO00116 658 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 SPAG7O75391 227 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 KLF8O95600 359 aaPredicted RBP10.25□□□□□ -0.77
NEK9-205ENST00000555405 PRKCHP24723 683 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 PMLP29590 882 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 PDE1BQ01064 536 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 QPCTQ16769 361 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 PTPRNQ16849 979 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 GDPD4Q6W3E5 623 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 DENND6AQ8IWF6 608 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 PCDH20Q8N6Y1 951 aaKnown RBP10.25□□□□□ -0.77
NEK9-205ENST00000555405 EIF1ADQ8N9N8 165 aaKnown RBP10.25□□□□□ -0.77
NEK9-205ENST00000555405 GSDMBQ8TAX9 411 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 WFIKKN2Q8TEU8 576 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 CDKL2Q92772 493 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 PTPRN2Q92932 1015 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 PBXIP1Q96AQ6 731 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 MYOCQ99972 504 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 SARDHQ9UL12 918 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 HS3ST2Q9Y278 367 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 STON1Q9Y6Q2 735 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 MAP2K7O14733 419 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 RNF40O75150 1001 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 PRLP01236 227 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 PGAM1P18669 254 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 ARSDP51689 593 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 MAGOHP61326 146 aaKnown RBP10.25□□□□□ -0.77
NEK9-205ENST00000555405 AP1S1P61966 158 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 GRSF1Q12849 480 aaKnown RBP eCLIP10.25□□□□□ -0.77
NEK9-205ENST00000555405 ARHGEF7Q14155 803 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 PKN3Q6P5Z2 889 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 RFLNAQ6ZTI6 216 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 KCNMB4Q86W47 210 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 CYP4X1Q8N118 509 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 PIP4K2CQ8TBX8 421 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 FRMD8Q9BZ67 464 aaPredicted RBP10.25□□□□□ -0.77
NEK9-205ENST00000555405 EIF2B3Q9NR50 452 aaKnown RBP10.25□□□□□ -0.77
NEK9-205ENST00000555405 SMYD2Q9NRG4 433 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms