RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 ZNF548Q8NEK5 533 aaPredicted RBP11.93□□□□□ -0.5
VRK1-204ENST00000555351 ATL2Q8NHH9 583 aa11.93□□□□□ -0.5
VRK1-204ENST00000555351 ZNF564Q8TBZ8 553 aaPredicted RBP11.93□□□□□ -0.5
VRK1-204ENST00000555351 NSMCE1Q8WV22 266 aa11.93□□□□□ -0.5
VRK1-204ENST00000555351 NUDCD1Q96RS6 583 aa11.93□□□□□ -0.5
VRK1-204ENST00000555351 ZNF670Q9BS34 389 aa11.93□□□□□ -0.5
VRK1-204ENST00000555351 HAUS2Q9NVX0 235 aa11.93□□□□□ -0.5
VRK1-204ENST00000555351 AMACRQ9UHK6 382 aa11.93□□□□□ -0.5
VRK1-204ENST00000555351 SALL4Q9UJQ4 1053 aa11.93□□□□□ -0.5
VRK1-204ENST00000555351 SRRM3A6NNA2 597 aaPredicted RBP11.92□□□□□ -0.5
VRK1-204ENST00000555351 AQP9O43315 295 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 LZTS3O60299 673 aaPredicted RBP11.92□□□□□ -0.5
VRK1-204ENST00000555351 KRT37O76014 449 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 KRT7P08729 469 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 HOXC4P09017 264 aaPredicted RBP11.92□□□□□ -0.5
VRK1-204ENST00000555351 C6P13671 934 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 JUPP14923 745 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 JUNDP17535 347 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 CES1P23141 567 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 IL4RP24394 825 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 LIG3P49916 1009 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 SLC10A7Q0GE19 358 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 EIF2B5Q13144 721 aaKnown RBP11.92□□□□□ -0.5
VRK1-204ENST00000555351 MTM1Q13496 603 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 KRT81Q14533 505 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 PAFAH1B3Q15102 231 aaKnown RBP11.92□□□□□ -0.5
VRK1-204ENST00000555351 TXNRD3NBQ6F5E7 133 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 ARHGAP36Q6ZRI8 547 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 DPPA4Q7L190 304 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 VSIG1Q86XK7 387 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 ATPAF2Q8N5M1 289 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 TEX26Q8N6G2 289 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 TSGA13Q96PP4 275 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 MGME1Q9BQP7 344 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 NRSN2Q9GZP1 204 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 ETNK2Q9NVF9 386 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 UCKL1Q9NWZ5 548 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 CTTNBP2NLQ9P2B4 639 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 SPASTQ9UBP0 616 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 IGF2RP11717 2491 aa11.92□□□□□ -0.5
VRK1-204ENST00000555351 ARID1BQ8NFD5 2236 aaPredicted RBP11.91□□□□□ -0.5
VRK1-204ENST00000555351 TRABD2BA6NFA1 517 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 LMO7DNF2Z398 122 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 K7ESM1 405 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 MUSKO15146 869 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 MTA2O94776 668 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 HTR1BP28222 390 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 ARHGAP25P42331 645 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 SCNN1BP51168 640 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 DAB2P98082 770 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 DPYSL3Q14195 570 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 TCEAL1Q15170 157 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 IRF4Q15306 451 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 WSCD2Q2TBF2 565 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 LRRC73Q5JTD7 316 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 MARC1Q5VT66 337 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 ALG1LQ6GMV1 187 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 TIGD7Q6NT04 549 aaPredicted RBP11.91□□□□□ -0.5
VRK1-204ENST00000555351 LVRNQ6Q4G3 990 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 CNGA4Q8IV77 575 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 RHOT2Q8IXI1 618 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 FSTL5Q8N475 847 aaPredicted RBP11.91□□□□□ -0.5
VRK1-204ENST00000555351 DCBLD1Q8N8Z6 715 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 NETO2Q8NC67 525 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 FAF2Q96CS3 445 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 BTBD6Q96KE9 485 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 APOLD1Q96LR9 279 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 WRAP53Q9BUR4 548 aaKnown RBP11.91□□□□□ -0.5
VRK1-204ENST00000555351 SLC13A1Q9BZW2 595 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 DEF6Q9H4E7 631 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 MBNL1Q9NR56 388 aaKnown RBP11.91□□□□□ -0.5
VRK1-204ENST00000555351 ABHD10Q9NUJ1 306 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 KLF15Q9UIH9 416 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 INTUQ9ULD6 942 aa11.91□□□□□ -0.5
VRK1-204ENST00000555351 ANKRD36A6QL64 1941 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 PSMD11O00231 422 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 AKR1B10O60218 316 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 MFAP3LO75121 409 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 ELFN1P0C7U0 828 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 ITIH2P19823 946 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 CCNCP24863 283 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 GARSP41250 739 aaKnown RBP11.9□□□□□ -0.5
VRK1-204ENST00000555351 MMP13P45452 471 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 RPIAP49247 311 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 PPARDQ03181 441 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 GALNT2Q10471 571 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 RALGDSQ12967 914 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 NFATC4Q14934 902 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 RTP5Q14D33 572 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 IFI16Q16666 785 aaKnown RBP11.9□□□□□ -0.5
VRK1-204ENST00000555351 CCDC157Q569K6 752 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 ANKRD20A8PQ5CZ79 823 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 TPRG1LQ5T0D9 272 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 HES3Q5TGS1 186 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 SARM1Q6SZW1 724 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 LIPIQ6XZB0 460 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 ZSWIM9Q86XI8 627 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 TP53INP2Q8IXH6 220 aa11.9□□□□□ -0.5
VRK1-204ENST00000555351 RAVER1Q8IY67 606 aaKnown RBP11.9□□□□□ -0.5
VRK1-204ENST00000555351 PHACTR4Q8IZ21 702 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms