RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 GJB3O75712 270 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 PAK4O96013 591 aaPredicted RBP12.19□□□□□ -0.46
SRP54-206ENST00000555317 WNT1P04628 370 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 ELFN1P0C7U0 828 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 THEGLP0DJG4 465 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 CSRP1P21291 193 aaKnown RBP12.19□□□□□ -0.46
SRP54-206ENST00000555317 TGM2P21980 687 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 CTNNA1P35221 906 aaKnown RBP12.19□□□□□ -0.46
SRP54-206ENST00000555317 MMP12P39900 470 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 FOXK2Q01167 660 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 PPIDQ08752 370 aaKnown RBP12.19□□□□□ -0.46
SRP54-206ENST00000555317 ZNF423Q2M1K9 1284 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 ARMC12Q5T9G4 340 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 PEX26Q7Z412 305 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 NAXDQ8IW45 347 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 PGBD5Q8N414 524 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 TEX26Q8N6G2 289 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 TMEM145Q8NBT3 493 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 DENND6BQ8NEG7 585 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 DEFB124Q8NES8 71 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 MAML1Q92585 1016 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 P3H4Q92791 437 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 ELF4Q99607 663 aaPredicted RBP12.19□□□□□ -0.46
SRP54-206ENST00000555317 FERMT1Q9BQL6 677 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 C1QTNF2Q9BXJ5 285 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 GRPEL1Q9HAV7 217 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 IL21RQ9HBE5 538 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 SALL4Q9UJQ4 1053 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 AMFRQ9UKV5 643 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 PCDHGC4Q9Y5F7 938 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 PCDHGB2Q9Y5G2 931 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 KCNK1O00180 336 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 KCNK3O14649 394 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 RIOK3O14730 519 aaKnown RBP12.18□□□□□ -0.46
SRP54-206ENST00000555317 FLRT2O43155 660 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 SPINT1O43278 529 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 KRT86O43790 486 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 KCNK5O95279 499 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 JCHAINP01591 159 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 PRKCGP05129 697 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 CYP2A6P11509 494 aaPredicted RBP12.18□□□□□ -0.46
SRP54-206ENST00000555317 C6P13671 934 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 CEACAM1P13688 526 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 CTNNA2P26232 953 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 RABIFP47224 123 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 MARCKSL1P49006 195 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 LIG3P49916 1009 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 EPHB1P54762 984 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 RWDD2BP57060 319 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 CLDN2P57739 230 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 COPS2P61201 443 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 IL9RQ01113 521 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 SLC10A2Q12908 348 aaPredicted RBP12.18□□□□□ -0.46
SRP54-206ENST00000555317 LLGL1Q15334 1064 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 PPP2R5EQ16537 467 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 TMEM52BQ4KMG9 183 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 NPNTQ6UXI9 565 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 KYAT3Q6YP21 454 aaKnown RBP12.18□□□□□ -0.46
SRP54-206ENST00000555317 USP45Q70EL2 814 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 DCP2Q8IU60 420 aaKnown RBP12.18□□□□□ -0.46
SRP54-206ENST00000555317 LRRN4Q8WUT4 740 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 TFB1MQ8WVM0 346 aaKnown RBP12.18□□□□□ -0.46
SRP54-206ENST00000555317 ASB12Q8WXK4 309 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 KRT35Q92764 455 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 ECHDC3Q96DC8 303 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 LENG8Q96PV6 779 aaPredicted RBP12.18□□□□□ -0.46
SRP54-206ENST00000555317 ERVMER34-1Q9H9K5 563 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 PCDHA3Q9Y5H8 950 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 RAI2Q9Y5P3 530 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 HS3ST3A1Q9Y663 406 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 TDRD6O60522 2096 aaKnown RBP12.18□□□□□ -0.46
SRP54-206ENST00000555317 LRRK1Q38SD2 2015 aa12.18□□□□□ -0.46
SRP54-206ENST00000555317 GOLGA4Q13439 2230 aaKnown RBP12.17□□□□□ -0.46
SRP54-206ENST00000555317 hCG_1818297A0A087WSY0 165 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 A0A1B0GTQ1 180 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 GRID2IPA4D2P6 1211 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 MIF4GDA9UHW6 222 aaKnown RBP12.17□□□□□ -0.46
SRP54-206ENST00000555317 TRAFD1O14545 582 aaPredicted RBP12.17□□□□□ -0.46
SRP54-206ENST00000555317 TM4SF5O14894 197 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 HTRA2O43464 458 aaPredicted RBP12.17□□□□□ -0.46
SRP54-206ENST00000555317 SH3BP5O60239 455 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 HLA-DQB2P05538 268 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 ITGAVP06756 1048 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 CCDC175P0C221 793 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 CD59P13987 128 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 ITIH2P19823 946 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 CR2P20023 1033 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 GRK6P43250 576 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 TNNT3P45378 269 aaPredicted RBP12.17□□□□□ -0.46
SRP54-206ENST00000555317 THOP1P52888 689 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 IFI35P80217 286 aaPredicted RBP12.17□□□□□ -0.46
SRP54-206ENST00000555317 DSC2Q02487 901 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 TRAF2Q12933 501 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 ARHGEF7Q14155 803 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 FGL2Q14314 439 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 LRRC14Q15048 493 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 GCNT7Q6ZNI0 430 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 Q6ZSR6 202 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 DPPA4Q7L190 304 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 ZSWIM9Q86XI8 627 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms