RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 LOC285095A0A1B0GVY8 99 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 CTAGE15A4D2H0 777 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 ANKRD66B4E2M5 251 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 E7EVH7 732 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 NEMP1O14524 444 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 AREL1O15033 823 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 MAP3K13O43283 966 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 TSPAN6O43657 245 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 NDUFS2O75306 463 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 SEMA4FO95754 770 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 AP2A1O95782 977 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 NDST3O95803 873 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 PRLP01236 227 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 CTAGE8P0CG41 777 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 HLA-DPA1P20036 260 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 ACSL1P33121 698 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 ABL2P42684 1182 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 LMAN1P49257 510 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 BASP1P80723 227 aaKnown RBP14.37□□□□□ -0.11
CHD8-208ENST00000555301 C2orf54Q08AI8 447 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 GPS1Q13098 491 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 PTK6Q13882 451 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 TRIP13Q15645 432 aaPredicted RBP14.37□□□□□ -0.11
CHD8-208ENST00000555301 FAXCQ5TGI0 409 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 NEK5Q6P3R8 708 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 KDELC2Q7Z4H8 507 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 CTAGE6Q86UF2 777 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 CTAGE4Q8IX94 777 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 OR2T34Q8NGX1 318 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 RMDN1Q96DB5 314 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 SCRN2Q96FV2 425 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 TRIB3Q96RU7 358 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 SRPK1Q96SB4 655 aaKnown RBP14.37□□□□□ -0.11
CHD8-208ENST00000555301 PCED1AQ9H1Q7 454 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 PCDH12Q9NPG4 1184 aa14.37□□□□□ -0.11
CHD8-208ENST00000555301 TPX2Q9ULW0 747 aaKnown RBP14.37□□□□□ -0.11
CHD8-208ENST00000555301 TBC1D3DA0A087WVF3 549 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 TBC1D3IA0A087WXS9 549 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 TBC1D3EA0A087X179 549 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 TBC1D3KA0A087X1G2 549 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 A0A0J9YYE9 177 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 TBC1D3FA6NER0 549 aaPredicted RBP14.36□□□□□ -0.11
CHD8-208ENST00000555301 TBC1D3LB9A6J9 549 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 RIOK3O14730 519 aaKnown RBP14.36□□□□□ -0.11
CHD8-208ENST00000555301 LILRB5O75023 590 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 TRBC1P01850 177 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 TBC1D3HP0C7X1 549 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 CYP2A6P11509 494 aaPredicted RBP14.36□□□□□ -0.11
CHD8-208ENST00000555301 PTGIRP43119 386 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 VPS41P49754 854 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 TAS2R38P59533 333 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 GALNT3Q14435 633 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 SPDYCQ5MJ68 293 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 KCTD11Q693B1 232 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 TBC1D3GQ6DHY5 549 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 TBC1D3CQ6IPX1 549 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 NAPEPLDQ6IQ20 393 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 LINC00523Q86TU6 105 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 JAMLQ86YT9 394 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 TBC1D3Q8IZP1 549 aaPredicted RBP14.36□□□□□ -0.11
CHD8-208ENST00000555301 TAB3Q8N5C8 712 aaPredicted RBP14.36□□□□□ -0.11
CHD8-208ENST00000555301 FAM160A2Q8N612 972 aaPredicted RBP14.36□□□□□ -0.11
CHD8-208ENST00000555301 PDCD7Q8N8D1 485 aaKnown RBP14.36□□□□□ -0.11
CHD8-208ENST00000555301 CADM4Q8NFZ8 388 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 MCCC1Q96RQ3 725 aaPredicted RBP14.36□□□□□ -0.11
CHD8-208ENST00000555301 EIF2B3Q9NR50 452 aaKnown RBP14.36□□□□□ -0.11
CHD8-208ENST00000555301 ASIC3Q9UHC3 531 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 INVSQ9Y283 1065 aa14.36□□□□□ -0.11
CHD8-208ENST00000555301 MYO18AQ92614 2054 aaKnown RBP14.35□□□□□ -0.11
CHD8-208ENST00000555301 FAM187AA6NFU0 413 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 CAPN8A6NHC0 703 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 FAM47DPA6NHR8 397 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 H0Y858 1186 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 HRO43593 1189 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 SUN1O94901 812 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 PCDH8O95206 1070 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 AGTP01019 485 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 FGF1P05230 155 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 APRTP07741 180 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 ATXN1LP0C7T5 689 aaKnown RBP14.35□□□□□ -0.11
CHD8-208ENST00000555301 ADRA1AP35348 466 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 MMP12P39900 470 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 ADCY8P40145 1251 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 PTPN5P54829 565 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 FAM193AP78312 1265 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 CDK16Q00536 496 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 RPL6Q02878 288 aaKnown RBP14.35□□□□□ -0.11
CHD8-208ENST00000555301 TCF15Q12870 199 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 SLC1A5Q15758 541 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 QPCTQ16769 361 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 TMEM52BQ4KMG9 183 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 LRRC73Q5JTD7 316 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 KIAA1161Q6NSJ0 714 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 RANBP10Q6VN20 620 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 CEP68Q76N32 757 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 DPPA4Q7L190 304 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 FRMD1Q8N878 549 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 PRSS33Q8NF86 280 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 CXorf40AQ8TE69 158 aa14.35□□□□□ -0.11
CHD8-208ENST00000555301 FOXJ1Q92949 421 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms