RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 ADAMTS4O75173 837 aa12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 ATP6V1G1O75348 118 aa12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 SIX3O95343 332 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 MLLT6P55198 1093 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 BCL2L1Q07817 233 aa12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 EMC10Q5UCC4 262 aa12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 DRICH1Q6PGQ1 229 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 RTN4RL1Q86UN2 441 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 CCNJLQ8IV13 435 aa12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 ZNF781Q8N8C0 355 aa12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 PTGR2Q8N8N7 351 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 FAM156AQ8NDB6 213 aa12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 TCF25Q9BQ70 676 aa12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 C1orf50Q9BV19 199 aa12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 GBA3Q9H227 469 aa12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 DYRK4Q9NR20 520 aa12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 WWOXQ9NZC7 414 aa12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 SPG21Q9NZD8 308 aa12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 MRPS23Q9Y3D9 190 aaKnown RBP12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 K7ERQ8 282 aa12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 GNGT2O14610 69 aa12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 FGF10O15520 208 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 C8AP07357 584 aa12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 DEFB103AP81534 67 aa12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 GNA12Q03113 381 aa12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 ACBD5Q5T8D3 534 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 RETSATQ6NUM9 610 aa12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 UBR7Q8N806 425 aa12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 RTL3Q8N8U3 475 aaKnown RBP12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 GFM2Q969S9 779 aaKnown RBP12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 LRRC39Q96DD0 335 aa12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 ZNF317Q96PQ6 595 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 OXCT2Q9BYC2 517 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 MMADHCQ9H3L0 296 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 FARP1Q9Y4F1 1045 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF40-206ENST00000555232 NBNO60934 754 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 CRTAMO95727 393 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 EOMESO95936 686 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 GGT5P36269 586 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 SLC1A2P43004 574 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 MS4A13Q5J8X5 152 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 PKN3Q6P5Z2 889 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 BANPQ8N9N5 519 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 OSGEPL1Q9H4B0 414 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 THEGQ9P2T0 379 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 OR6C75A6NL08 312 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 ACSL4O60488 711 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 CDK16Q00536 496 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 ARL13AQ5H913 290 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 YAF2Q8IY57 180 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 CNTD1Q8N815 330 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 PXYLP1Q8TE99 480 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 TSPAN17Q96FV3 270 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 CATSPERZQ9NTU4 200 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 NDE1Q9NXR1 346 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 GIMAP2Q9UG22 337 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 HAS3O00219 553 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 VPS26AO75436 327 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 AHSGP02765 367 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 BPGMP07738 259 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 PPP3CCP48454 512 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 APLP1P51693 650 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 BRMS1LQ5PSV4 323 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 VAT1Q99536 393 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 MLPHQ9BV36 600 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 ADGRE3Q9BY15 652 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 PPCSQ9HAB8 311 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 ASAH2Q9NR71 780 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 GALNT8Q9NY28 637 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 FKBPLQ9UIM3 349 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 RAI2Q9Y5P3 530 aa12.29□□□□□ -0.44
ARHGEF40-206ENST00000555232 ANGPT2O15123 496 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 MATN3O15232 486 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 MC4RP32245 332 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 ABCE1P61221 599 aaKnown RBP12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 CYTH1Q15438 398 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 PIK3R6Q5UE93 754 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 SCD5Q86SK9 330 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 FSTL5Q8N475 847 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 CDYL2Q8N8U2 506 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 TLR9Q9NR96 1032 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 OSER1Q9NX31 292 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 Q9Y3F1 56 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 RNF103-CHMP3A0A140T963 221 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 TBC1D3BA6NDS4 549 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 LZTS3O60299 673 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 KRT36O76013 467 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 USP1O94782 785 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 FYNP06241 537 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 IGFBP4P22692 258 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 PTDSS1P48651 473 aaKnown RBP12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 NTHL1P78549 312 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 CLNKQ7Z7G1 428 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 PDZD8Q8NEN9 1154 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 ACVR1CQ8NER5 493 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 SNRNP27Q8WVK2 155 aaKnown RBP12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 SORCS1Q8WY21 1168 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 SLCO2A1Q92959 643 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 CDRT15Q96T59 188 aa12.28□□□□□ -0.44
ARHGEF40-206ENST00000555232 ACAT2Q9BWD1 397 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms