RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 CCNG1P51959 295 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 FZD5Q13467 585 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 TAF1BQ53T94 588 aaPredicted RBP17.55■□□□□ 0.4
SHOX-204ENST00000554971 FSTL4Q6MZW2 842 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 KYAT3Q6YP21 454 aaKnown RBP17.55■□□□□ 0.4
SHOX-204ENST00000554971 MARK2Q7KZI7 788 aaKnown RBP17.55■□□□□ 0.4
SHOX-204ENST00000554971 TFAP2DQ7Z6R9 452 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 FAM3CQ92520 227 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 SLC7A6OSQ96CW6 309 aaPredicted RBP17.55■□□□□ 0.4
SHOX-204ENST00000554971 P2RY13Q9BPV8 354 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 SIKE1Q9BRV8 207 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 ARHGEF4Q9NR80 690 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 KCNK4Q9NYG8 393 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 SIRPGQ9P1W8 387 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 MAD1L1Q9Y6D9 718 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 CXorf49A8MYA2 514 aaPredicted RBP17.54■□□□□ 0.4
SHOX-204ENST00000554971 DLDP09622 509 aaKnown RBP17.54■□□□□ 0.4
SHOX-204ENST00000554971 AMPD1P23109 780 aa17.54■□□□□ 0.4
SHOX-204ENST00000554971 TARSP26639 723 aaKnown RBP17.54■□□□□ 0.4
SHOX-204ENST00000554971 CD70P32970 193 aa17.54■□□□□ 0.4
SHOX-204ENST00000554971 KDSRQ06136 332 aa17.54■□□□□ 0.4
SHOX-204ENST00000554971 MTM1Q13496 603 aa17.54■□□□□ 0.4
SHOX-204ENST00000554971 CCINQ13939 588 aa17.54■□□□□ 0.4
SHOX-204ENST00000554971 GEN1Q17RS7 908 aa17.54■□□□□ 0.4
SHOX-204ENST00000554971 FAXCQ5TGI0 409 aa17.54■□□□□ 0.4
SHOX-204ENST00000554971 TMEM215Q68D42 235 aa17.54■□□□□ 0.4
SHOX-204ENST00000554971 MTDHQ86UE4 582 aaKnown RBP17.54■□□□□ 0.4
SHOX-204ENST00000554971 MFN1Q8IWA4 741 aa17.54■□□□□ 0.4
SHOX-204ENST00000554971 CARNMT1Q8N4J0 409 aa17.54■□□□□ 0.4
SHOX-204ENST00000554971 AGAP11Q8TF27 550 aa17.54■□□□□ 0.4
SHOX-204ENST00000554971 PTPRN2Q92932 1015 aa17.54■□□□□ 0.4
SHOX-204ENST00000554971 ZYG11BQ9C0D3 744 aa17.54■□□□□ 0.4
SHOX-204ENST00000554971 TBC1D17Q9HA65 648 aa17.54■□□□□ 0.4
SHOX-204ENST00000554971 DEC1Q9P2X7 70 aa17.54■□□□□ 0.4
SHOX-204ENST00000554971 MCM8Q9UJA3 840 aa17.54■□□□□ 0.4
SHOX-204ENST00000554971 HAO1Q9UJM8 370 aa17.54■□□□□ 0.4
SHOX-204ENST00000554971 STK38LQ9Y2H1 464 aa17.54■□□□□ 0.4
SHOX-204ENST00000554971 NYNRINQ9P2P1 1898 aaKnown RBP17.54■□□□□ 0.4
SHOX-204ENST00000554971 KANSL1LA0AUZ9 987 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 PRRT4C9JH25 899 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 PIAS1O75925 651 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 CHRM1P11229 460 aaPredicted RBP17.53■□□□□ 0.4
SHOX-204ENST00000554971 EPHB2P29323 1055 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 DGKGP49619 791 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 NUMBP49757 651 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 FRG1Q14331 258 aaKnown RBP17.53■□□□□ 0.4
SHOX-204ENST00000554971 RWDD4Q6NW29 188 aaKnown RBP17.53■□□□□ 0.4
SHOX-204ENST00000554971 ZNF852Q6ZMS4 543 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 CHST9Q7L1S5 443 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 TERB1Q8NA31 727 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 FIBINQ8TAL6 211 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 TBC1D31Q96DN5 1066 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 MSANTD3Q96H12 275 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 EPAS1Q99814 870 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 LTB4R2Q9NPC1 389 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 C11orf16Q9NQ32 467 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 ABCB8Q9NUT2 735 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 INTS6Q9UL03 887 aaKnown RBP17.53■□□□□ 0.4
SHOX-204ENST00000554971 HCN2Q9UL51 889 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 TBC1D30Q9Y2I9 924 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 SLC27A6Q9Y2P4 619 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 MUC22E2RYF6 1773 aaPredicted RBP17.53■□□□□ 0.4
SHOX-204ENST00000554971 TYW5A2RUC4 315 aaKnown RBP17.53■□□□□ 0.4
SHOX-204ENST00000554971 K7EQS6 105 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 MTSS1O43312 755 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 CLDN11O75508 207 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 HAUS5O94927 633 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 KAT7O95251 611 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 EGFP01133 1207 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 LMNAP02545 664 aaKnown RBP17.53■□□□□ 0.4
SHOX-204ENST00000554971 PGAM1P18669 254 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 CDH4P55283 916 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 LMAN2Q12907 356 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 DPYSQ14117 519 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 CWF19L1Q69YN2 538 aaKnown RBP17.53■□□□□ 0.4
SHOX-204ENST00000554971 RFX8Q6ZV50 586 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 KIAA0907Q7Z7F0 614 aaPredicted RBP17.53■□□□□ 0.4
SHOX-204ENST00000554971 SKA1Q96BD8 255 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 THOC1Q96FV9 657 aaKnown RBP17.53■□□□□ 0.4
SHOX-204ENST00000554971 OXNAD1Q96HP4 312 aaPredicted RBP17.53■□□□□ 0.4
SHOX-204ENST00000554971 NSL1Q96IY1 281 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 TBC1D10AQ9BXI6 508 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 KCNK13Q9HB14 408 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 SMYD2Q9NRG4 433 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 HEY2Q9UBP5 337 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 NDRG2Q9UN36 371 aaKnown RBP17.53■□□□□ 0.4
SHOX-204ENST00000554971 TRIM33Q9UPN9 1127 aa17.53■□□□□ 0.4
SHOX-204ENST00000554971 MAN2B1O00754 1011 aa17.52■□□□□ 0.4
SHOX-204ENST00000554971 BGNP21810 368 aa17.52■□□□□ 0.4
SHOX-204ENST00000554971 CDH18Q13634 790 aa17.52■□□□□ 0.4
SHOX-204ENST00000554971 INSCQ1MX18 579 aa17.52■□□□□ 0.4
SHOX-204ENST00000554971 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.52■□□□□ 0.4
SHOX-204ENST00000554971 RFWD2Q8NHY2 731 aa17.52■□□□□ 0.4
SHOX-204ENST00000554971 UTP4Q969X6 686 aaKnown RBP17.52■□□□□ 0.4
SHOX-204ENST00000554971 SLC2A11Q9BYW1 496 aa17.52■□□□□ 0.4
SHOX-204ENST00000554971 TMEM248Q9NWD8 314 aa17.52■□□□□ 0.4
SHOX-204ENST00000554971 MFHAS1Q9Y4C4 1052 aa17.52■□□□□ 0.4
SHOX-204ENST00000554971 SHROOM3Q8TF72 1996 aa17.52■□□□□ 0.39
SHOX-204ENST00000554971 A0A0G2JND7 137 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 TMEM221A6NGB7 291 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms