RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 MYH10P35580 1976 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 MYO16Q9Y6X6 1858 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 CFAP54Q96N23 3096 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 ATG2BQ96BY7 2078 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 KIAA1549LQ6ZVL6 1849 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 TRAV19A0A0A6YYK7 116 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 ZNF840PA6NDX5 716 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 PRR23AA6NEV1 266 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 UNC119BA6NIH7 251 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 A8MXQ7 604 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 F8VP50 259 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 OVOL3O00110 214 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 CLDN5O00501 218 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 ZNF185O15231 689 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 KIF20AO95235 890 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 NDUFA10O95299 355 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 OLFM2O95897 454 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 ASS1P00966 412 aaKnown RBP4.38□□□□□ -1.71
VTI1B-203ENST00000554636 HLA-DRAP01903 254 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 PDGFRBP09619 1106 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 SP9P0CG40 484 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 RAP2AP10114 183 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 CHRNB1P11230 501 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 TDGF1P13385 188 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 CCDC130P13994 396 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 CPEP16870 476 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 ECHS1P30084 290 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 PSMC2P35998 433 aaKnown RBP4.38□□□□□ -1.71
VTI1B-203ENST00000554636 GNL1P36915 607 aaPredicted RBP4.38□□□□□ -1.71
VTI1B-203ENST00000554636 PIK3CAP42336 1068 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 PRCPP42785 496 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 RPS9P46781 194 aaKnown RBP4.38□□□□□ -1.71
VTI1B-203ENST00000554636 GCLMP48507 274 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 CDH8P55286 799 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 NOP14P78316 857 aaKnown RBP4.38□□□□□ -1.71
VTI1B-203ENST00000554636 MTF1Q14872 753 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 NOMO1Q15155 1222 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 MAPRE1Q15691 268 aaKnown RBP4.38□□□□□ -1.71
VTI1B-203ENST00000554636 ADRM1Q16186 407 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 TAF12Q16514 161 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 EDRF1Q3B7T1 1238 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 ARHGAP29Q52LW3 1261 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 ZNF667Q5HYK9 610 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 LY6G5CQ5SRR4 150 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 ZNF658Q5TYW1 1059 aaPredicted RBP4.38□□□□□ -1.71
VTI1B-203ENST00000554636 TXNDC8Q6A555 127 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 ZNF852Q6ZMS4 543 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 Q6ZPA2 131 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 Q6ZVL8 140 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 PAQR9Q6ZVX9 377 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 INTS8Q75QN2 995 aaKnown RBP4.38□□□□□ -1.71
VTI1B-203ENST00000554636 ASCL5Q7RTU5 278 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 GPRIN1Q7Z2K8 1008 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 YAF2Q8IY57 180 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 FAM186BQ8IYM0 893 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 CMTM8Q8IZV2 173 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 CELF5Q8N6W0 485 aaKnown RBP4.38□□□□□ -1.71
VTI1B-203ENST00000554636 MAB21L3Q8N8X9 362 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 B3GALNT2Q8NCR0 500 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 ZMIZ2Q8NF64 920 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 TAS1R2Q8TE23 839 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 STON2Q8WXE9 905 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 FAM3CQ92520 227 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 MRPS31Q92665 395 aaKnown RBP4.38□□□□□ -1.71
VTI1B-203ENST00000554636 MSANTD3Q96H12 275 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 C8orf48Q96LL4 319 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 CEP295NLQ96MC4 621 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 TIGD1Q96MW7 591 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 SLC2A13Q96QE2 648 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 TWNKQ96RR1 684 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 SLC22A12Q96S37 553 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 AGAP2Q99490 1192 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 B3GNT5Q9BYG0 378 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 ELOVL4Q9GZR5 314 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 SNX25Q9H3E2 840 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 C8orf33Q9H7E9 229 aaPredicted RBP4.38□□□□□ -1.71
VTI1B-203ENST00000554636 KIF9Q9HAQ2 790 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 AKIP1Q9NQ31 210 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 CCM2LQ9NUG4 571 aaPredicted RBP4.38□□□□□ -1.71
VTI1B-203ENST00000554636 GTSE1Q9NYZ3 720 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 UXTQ9UBK9 157 aaPredicted RBP4.38□□□□□ -1.71
VTI1B-203ENST00000554636 MAN1B1Q9UKM7 699 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 NDRG2Q9UN36 371 aaKnown RBP4.38□□□□□ -1.71
VTI1B-203ENST00000554636 ARHGAP26Q9UNA1 814 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 MAGED2Q9UNF1 606 aaPredicted RBP4.38□□□□□ -1.71
VTI1B-203ENST00000554636 FRMD4BQ9Y2L6 1034 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 DMRT1Q9Y5R6 373 aa4.38□□□□□ -1.71
VTI1B-203ENST00000554636 ZFHX2Q9C0A1 2572 aaPredicted RBP4.38□□□□□ -1.71
VTI1B-203ENST00000554636 MYOFQ9NZM1 2061 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 CENPVL1A0A0U1RR11 272 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 FAM92AA1XBS5 289 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 TRIM49BA6NDI0 452 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 TMEM191CA6NGB0 347 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 SPECC1L-ADORA2AF8WAN1 911 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 IKBKBO14920 756 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 SLC16A3O15427 465 aaKnown RBP4.37□□□□□ -1.71
VTI1B-203ENST00000554636 GPR39O43194 453 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 PHF2O75151 1096 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 OAS1P00973 400 aaKnown RBP4.37□□□□□ -1.71
VTI1B-203ENST00000554636 EPB41P11171 864 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms