RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 C6P13671 934 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 COMTP21964 271 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 GARSP41250 739 aaKnown RBP10.74□□□□□ -0.69
SHMT2-213ENST00000554600 SLC1A1P43005 524 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 RABIFP47224 123 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 RXRGP48443 463 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 NAP1L1P55209 391 aaKnown RBP10.74□□□□□ -0.69
SHMT2-213ENST00000554600 DYNLT1P63172 113 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 PDE1CQ14123 709 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-213ENST00000554600 TMEM52BQ4KMG9 183 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 HS1BP3Q53T59 392 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 TIGD7Q6NT04 549 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-213ENST00000554600 KDM7AQ6ZMT4 941 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 DBX2Q6ZNG2 339 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 ABI3BPQ7Z7G0 1075 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 ZSWIM9Q86XI8 627 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 DCP2Q8IU60 420 aaKnown RBP10.74□□□□□ -0.69
SHMT2-213ENST00000554600 TMTC1Q8IUR5 882 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 LRRC49Q8IUZ0 686 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 RHOT1Q8IXI2 618 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 SLC22A18ASQ8N1D0 253 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 PGBD5Q8N414 524 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 SPC24Q8NBT2 197 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 DENND6BQ8NEG7 585 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 LRRN4Q8WUT4 740 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 ASB12Q8WXK4 309 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 RNF25Q96BH1 459 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-213ENST00000554600 CNDP2Q96KP4 475 aaKnown RBP10.74□□□□□ -0.69
SHMT2-213ENST00000554600 LENG8Q96PV6 779 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-213ENST00000554600 RNF157Q96PX1 679 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 PANX2Q96RD6 677 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 NUDCD1Q96RS6 583 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 KLF6Q99612 283 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-213ENST00000554600 HAUS2Q9NVX0 235 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 DDX56Q9NY93 547 aaKnown RBP10.74□□□□□ -0.69
SHMT2-213ENST00000554600 TFR2Q9UP52 801 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 PCDHGC4Q9Y5F7 938 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 EPN1Q9Y6I3 576 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-213ENST00000554600 ASPMQ8IZT6 3477 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 ENC1O14682 589 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 APOL1O14791 398 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 FFAR2O15552 330 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 TNFSF14O43557 240 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 NDUFA10O95299 355 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 LDOC1O95751 146 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-213ENST00000554600 PEX11BO96011 259 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 CPP00450 1065 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 ELFN1P0C7U0 828 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 MX2P20592 715 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 NFKBIAP25963 317 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 IGFALSP35858 605 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 MMP12P39900 470 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 LIG3P49916 1009 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 GBE1Q04446 702 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 GALNT2Q10471 571 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 LRRC14Q15048 493 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 ACOX1Q15067 660 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 IRF4Q15306 451 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 DENND2CQ68D51 928 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 SLCO6A1Q86UG4 719 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 CCDC50Q8IVM0 306 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 PQLC3Q8N755 202 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 BAHD1Q8TBE0 780 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-213ENST00000554600 FAF2Q96CS3 445 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 SEMA3CQ99985 751 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 MGME1Q9BQP7 344 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 POLR1EQ9GZS1 481 aaKnown RBP10.73□□□□□ -0.69
SHMT2-213ENST00000554600 GOLPH3Q9H4A6 298 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 NOD2Q9HC29 1040 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 RBM22Q9NW64 420 aaKnown RBP eCLIP10.73□□□□□ -0.691e-9■■■■□ 20
SHMT2-213ENST00000554600 SEPT10Q9P0V9 454 aa10.73□□□□□ -0.69
SHMT2-213ENST00000554600 KIF26BQ2KJY2 2108 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 FAM208BQ5VWN6 2430 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 FASNP49327 2511 aaKnown RBP10.72□□□□□ -0.69
SHMT2-213ENST00000554600 GOLGA6L6A8MZA4 724 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 H3BM21 787 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 TRAFD1O14545 582 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-213ENST00000554600 MATN3O15232 486 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 SOCS5O75159 536 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 PIAS2O75928 621 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 PCCBP05166 539 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 CYP2A6P11509 494 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-213ENST00000554600 KRT10P13645 584 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 CCNB1P14635 433 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 CCNCP24863 283 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 EPHB1P54762 984 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 HNRNPKP61978 463 aaKnown RBP eCLIP10.72□□□□□ -0.69
SHMT2-213ENST00000554600 SHC2P98077 582 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 DAB2P98082 770 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 DSC2Q02487 901 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 AP1B1Q10567 949 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 TRAF2Q12933 501 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 DNAJC3Q13217 504 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 PTK2BQ14289 1009 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 FZD2Q14332 565 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 LLGL1Q15334 1064 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 RALGPS1Q5JS13 557 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 ARMC12Q5T9G4 340 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 LRRC38Q5VT99 294 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 KAZNQ674X7 775 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms