RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 SHBQ15464 509 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-211ENST00000554437 PDXDC1Q6P996 788 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 R3HCC1LQ7Z5L2 792 aaKnown RBP5.22□□□□□ -1.57
SCFD1-211ENST00000554437 FJX1Q86VR8 437 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 TDRPQ86YL5 185 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 DHX40Q8IX18 779 aaKnown RBP5.22□□□□□ -1.57
SCFD1-211ENST00000554437 ZCCHC9Q8N567 271 aaKnown RBP5.22□□□□□ -1.57
SCFD1-211ENST00000554437 IQCF1Q8N6M8 205 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 PCYOX1LQ8NBM8 494 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 C1orf131Q8NDD1 294 aaKnown RBP5.22□□□□□ -1.57
SCFD1-211ENST00000554437 ARRDC2Q8TBH0 407 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 SNAPC3Q92966 411 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 THOC3Q96J01 351 aaKnown RBP5.22□□□□□ -1.57
SCFD1-211ENST00000554437 TXNDC15Q96J42 360 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 ZNF479Q96JC4 524 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 NEUROD6Q96NK8 337 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 SEZ6LQ9BYH1 1024 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 HIPK2Q9H2X6 1198 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 PCDHB16Q9NRJ7 776 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 IRAK4Q9NWZ3 460 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 OR6C3Q9NZP0 311 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 A4GNTQ9UNA3 340 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 A0A1W2PPH5 198 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 TTC36A6NLP5 189 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 LACTBL1A8MY62 500 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 J3KRW8 73 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 TIMM23O14925 209 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 LDLRAD4O15165 306 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 BCAT2O15382 392 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-211ENST00000554437 TNFSF14O43557 240 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 KLK8O60259 260 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 MT-CYBP00156 380 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-211ENST00000554437 TFP02787 698 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 T-ENOLP0DO92 83 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 ETFAP13804 333 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 EPHA8P29322 1005 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-211ENST00000554437 C21orf33P30042 268 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-211ENST00000554437 GNAQP50148 359 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 EGR4Q05215 589 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 GRIK3Q13003 919 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 TXNDC8Q6A555 127 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 INO80CQ6PI98 192 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-211ENST00000554437 ZNF517Q6ZMY9 492 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-211ENST00000554437 SLC46A3Q7Z3Q1 461 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 NOXA1Q86UR1 476 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 NEUROG1Q92886 237 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 MARK4Q96L34 752 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 USP44Q9H0E7 712 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 PDCL3Q9H2J4 239 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 BPIFA1Q9NP55 256 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 CISD1Q9NZ45 108 aaKnown RBP5.21□□□□□ -1.58
SCFD1-211ENST00000554437 WNT16Q9UBV4 365 aa5.21□□□□□ -1.58
SCFD1-211ENST00000554437 EVPLQ92817 2033 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 IGKV2D-30A0A075B6S6 120 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 A0A1W2PQM1 296 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 NPIPB11E5RHQ5 1161 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 IFNL4K9M1U5 179 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 TCERG1O14776 1098 aaKnown RBP5.2□□□□□ -1.58
SCFD1-211ENST00000554437 SERPINI2O75830 405 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 NDUFB4O95168 129 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 VNN2O95498 520 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 UBL4AP11441 157 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 CPOXP36551 454 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 PIGAP37287 484 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 GABRB2P47870 512 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 MXI1P50539 228 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 GEMIN4P57678 1058 aaKnown RBP5.2□□□□□ -1.58
SCFD1-211ENST00000554437 TRAF2Q12933 501 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 PLCB4Q15147 1175 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 TCTN1Q2MV58 587 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 C8orf82Q6P1X6 216 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-211ENST00000554437 KLHL24Q6TFL4 600 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 ATF7IPQ6VMQ6 1270 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 CNTROBQ8N137 903 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 AADATQ8N5Z0 425 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 PPHLN1Q8NEY8 458 aaKnown RBP5.2□□□□□ -1.58
SCFD1-211ENST00000554437 CADM4Q8NFZ8 388 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 ELP5Q8TE02 316 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 ERGIC1Q969X5 290 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 FBXL8Q96CD0 374 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 ZNF570Q96NI8 536 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 NR1H4Q96RI1 486 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-211ENST00000554437 SLC25A33Q9BSK2 321 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 GLIS2Q9BZE0 524 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-211ENST00000554437 UNC45AQ9H3U1 944 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 MAGEE1Q9HCI5 957 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 TAS2R10Q9NYW0 307 aa5.2□□□□□ -1.58
SCFD1-211ENST00000554437 LSM4Q9Y4Z0 139 aaKnown RBP5.2□□□□□ -1.58
SCFD1-211ENST00000554437 CKAP5Q14008 2032 aa5.19□□□□□ -1.58
SCFD1-211ENST00000554437 DYTNA2CJ06 578 aa5.19□□□□□ -1.58
SCFD1-211ENST00000554437 LRRC53A6NM62 1247 aa5.19□□□□□ -1.58
SCFD1-211ENST00000554437 J3KR12 359 aa5.19□□□□□ -1.58
SCFD1-211ENST00000554437 SNAP23O00161 211 aa5.19□□□□□ -1.58
SCFD1-211ENST00000554437 KCNAB3O43448 404 aa5.19□□□□□ -1.58
SCFD1-211ENST00000554437 EPB41L2O43491 1005 aaKnown RBP5.19□□□□□ -1.58
SCFD1-211ENST00000554437 KCNJ13O60928 360 aa5.19□□□□□ -1.58
SCFD1-211ENST00000554437 SEC31AO94979 1220 aaKnown RBP5.19□□□□□ -1.58
SCFD1-211ENST00000554437 RTN3O95197 1032 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-211ENST00000554437 MCCP23508 829 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms